Gene Information

Name : BPSL0775 (BPSL0775)
Accession : YP_107400.1
Strain :
Genome accession: NC_006350
Putative virulence/resistance : Virulence
Product : response regulator transcription regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 902391 - 903134 bp
Length : 744 bp
Strand : -
Note : Similar to Bordetella pertussis transcriptional regulatory protein, BasR SWALL:Q9S3M3 (EMBL:AJ132741) (223 aa) fasta scores: E(): 3.2e-37, 53.6% id in 222 aa, and to Ralstonia solanacearum probable response regulator transcription regulator protein rsc055

DNA sequence : 
ATGCGAATTCTCATCGCCGAAGACGACAGCATACTAGCGGACGGCCTCACCCGGTCACTCCGCCAATCGGGCTATGCCGT
CGATCACGTGAGGAACGGCGTCGAGGCCGACACGGCCCTGTCGATGCAGACTTTCGACCTGCTGATCCTCGATCTCGGCC
TGCCCAGAATGTCCGGCCTCGAGGTGCTGCGCCGCCTGCGCGCGCGCAACTCGAACCTGCCCGTGCTGATCCTGACGGCC
GCCGACAGCGTCGACGAGCGCGTGAAAGGGCTCGACCTGGGCGCCGACGACTACATGGCGAAGCCGTTCGCGCTCAACGA
GCTCGAGGCGCGCGTGCGCGCGCTGACGCGGCGCGGCGCGGGAGGCGGGCCGACCGTCGTGCGGCATGGCTCGCTGTCGT
TCGACCAGGTCGGCCGGATCGCCTATGCGAACGAACGCGTGCTCGAGCTGTCCGCGCGCGAGCTCGGGCTGCTCGAGGTG
CTGCTGCAGCGCATCGGCCGGCTGGTGTCGAAGGAGCAGCTCGTCGATCACCTGTGCGAATGGGGCGAGGAAGTCAGCAA
CAACGCGATCGAGGTCTACGTCCACCGGCTGCGCAAGAAGATCGAGCCGAGCGGCGTGCGGATCACGACCGTGCGCGGCC
TCGGCTACTGCCTCGAGAAAGCCGCGCCCGCGGGCGCGAGCGACGCGCCGAACGCCGCCGCGTCGCCGGCGGCCGAGGCC
GTCGCCGGCCAGCCGGTGCGCTAG

Protein sequence : 
MRILIAEDDSILADGLTRSLRQSGYAVDHVRNGVEADTALSMQTFDLLILDLGLPRMSGLEVLRRLRARNSNLPVLILTA
ADSVDERVKGLDLGADDYMAKPFALNELEARVRALTRRGAGGGPTVVRHGSLSFDQVGRIAYANERVLELSARELGLLEV
LLQRIGRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKKIEPSGVRITTVRGLGYCLEKAAPAGASDAPNAAASPAAEA
VAGQPVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 9e-38 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPSL0775 YP_107400.1 response regulator transcription regulatory protein BAC0487 Protein 9e-37 45
BPSL0775 YP_107400.1 response regulator transcription regulatory protein BAC0083 Protein 4e-36 45
BPSL0775 YP_107400.1 response regulator transcription regulatory protein BAC0638 Protein 1e-29 44
BPSL0775 YP_107400.1 response regulator transcription regulatory protein BAC0347 Protein 5e-34 42
BPSL0775 YP_107400.1 response regulator transcription regulatory protein NC_002516.2.879194.p Protein 2e-31 42
BPSL0775 YP_107400.1 response regulator transcription regulatory protein BAC0308 Protein 2e-31 41
BPSL0775 YP_107400.1 response regulator transcription regulatory protein CP001138.1.gene1939. Protein 3e-29 41
BPSL0775 YP_107400.1 response regulator transcription regulatory protein BAC0197 Protein 2e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPSL0775 YP_107400.1 response regulator transcription regulatory protein VFG1390 Protein 1e-36 44
BPSL0775 YP_107400.1 response regulator transcription regulatory protein VFG0473 Protein 2e-40 44
BPSL0775 YP_107400.1 response regulator transcription regulatory protein VFG0475 Protein 3e-29 41