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Name : BPSL3378 (BPSL3378) Accession : YP_109972.1 Strain : Genome accession: NC_006350 Putative virulence/resistance : Resistance Product : heavy metal resistance membrane ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 4008608 - 4011118 bp Length : 2511 bp Strand : - Note : Similar to Pseudomonas putida CadA SWALL:Q93TP6 (EMBL:AF333961) (737 aa) fasta scores: E(): 4e-100, 65.9% id in 745 aa, and to Ralstonia metallidurans Pb-efflux ATPase PbrA SWALL:Q9AKR5 (EMBL:AJ278984) (798 aa) fasta scores: E(): 1.1e-93, 66.94% id in 714 DNA sequence : ATGACCGAGGCCACCCGGGCCGAAAACCGGCCGCGAACGCCAGAAGCCGATCGCGGTGGCGCGCAGTCGGGCGATGCGCG CACATCGGCGCGCGCCGCTGGCTGCTGCTCGCACCATCACCCGCATGGCGAGGTCGAAACGCAGGCGAATCTCGCGGTTC AGTCAAGCAATCGCGATTCGAGCGACCACGCACATGCACCCCATTCGCATGCGAACGGCGACCATCCGCACGACCACGAC CACGACCACGACCACGACCACGACCACGACCACGACCACGACCGCGACCACGACGGCGCGGCGTGCTGCGCGCCCGCCCC CGTCGCGTTCGCGCCGTTGCCCGGCGCGCGAAAGGCCGCCGGCGGCCGTGTGCGCTCGGCGTTCCGGATCATGCAGATGG ACTGCCCGACCGAGGAGACACTGATCCGCAAGAAGCTGGGCGCGATGTCCGAAGTCGCGGCGCTCGAATTCAACCTGATG CAGCGGATGCTCGCGGTCGAGCACGTGCCGGGCGCGGAAGCCGGCATCGCCGCCGCGATCCGCTCGCTCGGCATGACGCC CGAACAGGCGGACGCCGGCGCGTCGGGCCGTGGCGCGTTGCCCGCGCCGGCCGACGCGCCGCGCCCGTGGTGGCCGCTCG CGGTCGCGGGCGTCGCGGCGGCGGCGTCGGAAGCGGCCACGTGGCTGCAACTGCCGGTATGGCTCGCCGCCGCGCTCGCG CTCGCCGCGGTCGCGACCTGCGGCCTCGGCACGTATCGCAAGGGCTGGATCGCGCTCACGAACGGCAACCTGAACATCAA CGCGCTGATGAGCATCGCGGTGACGGGCGCGATGGCGATTGGCCAGTGGCCCGAGGCCGCGATGGTGATGGTGCTCTTCA CCGTCGCCGAATTGATCGAGGCGCGCTCGCTCGACCGTGCGCGCAACGCGATCCAGAGCCTGATGCGCCTCGCGCCCGAC ACCGTGACGCTCAGGCAGCCCGACGGCACGTGGCAGCCGGTCGACGCCGCGCAGGTCGCGCTCGGTGCGATCGTGCGCGT GAAGCCCGGCGAGCGCATCGGCCTCGACGGCGAGATCGTTGCCGGCCGCTCGACCGTCAACCAGGCGCCGATCACGGGCG AGAGCCTGCCCGTCGAGAAAACCGAGGGCGACGCGGTGTACGCGGGCACGATCAACGAAGCCGGCTCGTTCGAATATCGG GTGACGGCGGTCGCGAGCAACACGACGCTCGCGCGGATCATCCATGCGGTCGAGGAGGCGCAGGGCGCGAAGGCGCCGAC GCAGCGCTTCGTCGACAGCTTCGCGCGCGTCTACACGCCGATCGTGTTCGCGATCGCGCTCGTCGTCGCGATCGCGCCGC CGCTCGTGCTCGACGGCGCATGGCGCGACTGGATCTATCGCGCGCTCGTGCTGCTCGTGATCGCGTGCCCATGCGCGCTC GTGATCTCGACGCCCGTGACGATCGTATCGGGGCTCGCGGCGGCCGCGCGGCGCGGGATTCTCGTGAAGGGCGGCGTGTA CCTCGAGCAGGGGCGCCGCCTCGCGTGGCTCGCGCTCGACAAGACGGGCACGATCACGCGCGGCAAGCCGGTGCAGACCG ATTTCGAGATGCGCGCAGCCGACGTCGACGCCGCGCTCGTGCGGGGGCTCGCCGCGAGCCTCGCCGCGCGCTCGGATCAC CCGGTTTCGCAGGCGGTCGCGGCGGCGAGCGCGGCTCAAGCCGGCGCGGGCGGCGTCCCGCGCGCGAAGCCCGCGTCGTT CGCCGACGTCGCCGATTTCGAGGCGATTCCCGGCCGCGGCGTGCGCGGCAAGATCGACGGCGTGCCGTACTGGCTCGGCA ATCATCGCCTCGTCGAGGAGCTCGACTGCTGCACGAGCGCGCTCGAAGCGCGTCTCGACGAGCTCGAGCGGCAGGGCAAG ACGGTCGTGATGCTGATCGACGGCGCGCGCGTGCTCGGCCTCTTCGCGGTGGCCGACACGGTGAAGGACACGAGCCGCGC GGCGGTTGCCGAGCTGCACGCGCTCGGCATCAAGACCGCGATGCTGACGGGCGACAACCCGCACACCGCGCAAGCGATCG CGCAGCAGGTCGGCATCGACGACGCGCGCGGCAACCAACTGCCGCAGGACAAGCTCGCCGCCGTCGAAGCGCTCGCGGCG GGCGGCCGCGCGGTCGGCATGGTCGGCGACGGGATCAACGACGCGCCGGCGCTCGCGCGCGCCGACATCGGCTTCGCGAT GGGCGCGATGGGCACCGATACCGCGATCGAGACGGCCGACGTCGCGCTGATGGACGACGACCTGCGCAAGATCCCGGCGT TCGTGCGGCTGTCGCGCGCGACGCATCGCGTGCTCGTGCAGAACATCGCGTTCGCGCTCGCCGTGAAGGCGGTGTTCGTC GGCCTCACGGTCGCGGGGATGGGCACGATGTGGATGGCGGTGTTCGCCGACGCGGGCGCGAGCCTCATCGTCGTCGGCAA CGGCTTGCGGCTGTTGCGCCGCGGCCAATGA Protein sequence : MTEATRAENRPRTPEADRGGAQSGDARTSARAAGCCSHHHPHGEVETQANLAVQSSNRDSSDHAHAPHSHANGDHPHDHD HDHDHDHDHDHDHDRDHDGAACCAPAPVAFAPLPGARKAAGGRVRSAFRIMQMDCPTEETLIRKKLGAMSEVAALEFNLM QRMLAVEHVPGAEAGIAAAIRSLGMTPEQADAGASGRGALPAPADAPRPWWPLAVAGVAAAASEAATWLQLPVWLAAALA LAAVATCGLGTYRKGWIALTNGNLNINALMSIAVTGAMAIGQWPEAAMVMVLFTVAELIEARSLDRARNAIQSLMRLAPD TVTLRQPDGTWQPVDAAQVALGAIVRVKPGERIGLDGEIVAGRSTVNQAPITGESLPVEKTEGDAVYAGTINEAGSFEYR VTAVASNTTLARIIHAVEEAQGAKAPTQRFVDSFARVYTPIVFAIALVVAIAPPLVLDGAWRDWIYRALVLLVIACPCAL VISTPVTIVSGLAAAARRGILVKGGVYLEQGRRLAWLALDKTGTITRGKPVQTDFEMRAADVDAALVRGLAASLAARSDH PVSQAVAAASAAQAGAGGVPRAKPASFADVADFEAIPGRGVRGKIDGVPYWLGNHRLVEELDCCTSALEARLDELERQGK TVVMLIDGARVLGLFAVADTVKDTSRAAVAELHALGIKTAMLTGDNPHTAQAIAQQVGIDDARGNQLPQDKLAAVEALAA GGRAVGMVGDGINDAPALARADIGFAMGAMGTDTAIETADVALMDDDLRKIPAFVRLSRATHRVLVQNIAFALAVKAVFV GLTVAGMGTMWMAVFADAGASLIVVGNGLRLLRRGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 5e-116 | 46 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 5e-116 | 46 |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 4e-115 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BPSL3378 | YP_109972.1 | heavy metal resistance membrane ATPase | BAC0298 | Protein | 0.0 | 66 |
