Gene Information

Name : tpx (BPSL2987)
Accession : YP_109581.1
Strain :
Genome accession: NC_006350
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : 1.11.1.-
Position : 3560841 - 3561344 bp
Length : 504 bp
Strand : +
Note : Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella dysenteriae thiol peroxidase Tpx or b1324 or c1796 or z2452 or ecs1903 SWALL:TPX_ECOLI (SWALL:P37901) (167 aa) fasta scores: E(): 5.7e-36, 62.19% id in 164 aa, and to

DNA sequence : 
ATGAGCAAAGTCACGCTGGGTGGCAACCCGATCGACATCGCCGGCACGTTTCCGACGGTCGGCTCGCCGGCCCCCGACTT
CAAGCTGGTCGGCAAGGACCTCGCCGACGTGTCGCTCGCGACCTTCGCGGGCAAGCGCAAGGTGCTGAACATCGTCCCGA
GCCTCGACACGCCGACCTGCGCGGCGTCGACCCGCAAGTTCAACGAAGCGGCGAGCAAGCTCGACAACACGGTCGTCGTC
GTCGTGTCGGCGGATCTGCCGTTTGCCGCAACCCGCTTCTGCACGACGGAAGGCCTCGCGAACGTCATCACCGCGTCGAC
GTTCCGGGGCGGCCGCGCGTTCGCCGACGCGTACGGCGTGAACGTGACAAGCGGCCCGCTCGACGGCCTGGCCGCGCGCG
CGGTCATCGTGATCGACGAAAACGACAAGGTGACGTACACCGAGCTCGTCGGCGAGATCAAGAACGAGCCGAACTACGAC
GCCGCGCTCGCCGCGCTGAAATAA

Protein sequence : 
MSKVTLGGNPIDIAGTFPTVGSPAPDFKLVGKDLADVSLATFAGKRKVLNIVPSLDTPTCAASTRKFNEAASKLDNTVVV
VVSADLPFAATRFCTTEGLANVITASTFRGGRAFADAYGVNVTSGPLDGLAARAVIVIDENDKVTYTELVGEIKNEPNYD
AALAALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-33 51
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-33 51
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-33 51
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 7e-34 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_109581.1 thiol peroxidase VFG0087 Protein 3e-34 51