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Name : wcbC (BPSL2807) Accession : YP_109402.1 Strain : Genome accession: NC_006350 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis/export protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1596 EC number : - Position : 3355330 - 3356493 bp Length : 1164 bp Strand : - Note : Similar to Actinobacillus pleuropneumoniae capsular polysaccharide biosynthesis/export protein CpxD precursor SWALL:Q44132 (EMBL:U36397) (394 aa) fasta scores: E(): 6.4e-52, 41.19% id in 386 aa, Identical to Burkholderia mallei capsular polysaccharide bio DNA sequence : ATGTCGCGTCCATTCTGCAAAACGTTTTTGATCGCGTGTGTCATGGGCGCGGTCACGCTCGCCGGTTGCTCAAGTATCCC TACGTCGGGGGCCAGTGGCGCGCAAATCGCGCGGGCTGCGCAGAGTCCATCCGGAATTCAGATCGTCGATGTGACCGAGG ATGTCGCGCGCCAGCTGTTTGCTGATCGAAACACGGCGGACTTCGTGACGGCGCTGGGCGGCGGTGCGTCGTTCCGGCAA CAGTTGGGCGTCGGCGATACGATTCAGGTGTCCATCTGGGAGGCGCCACCCGCCACGCTTTTTGGCGCGGCTCAGTCGGA AGGGAGTTCGGGGCCGGCGAACGCGCGCGTGACGGTGCTGCCCGATCAAGCCATCGATGGCGACGGCAATGTCAATATTC CGTTTGCGGGCCAGGTCAAGGCGGCCGGCCGCTCGCCCACGCAGTTGGCGCGTGAGATTGCCGCGCGGCTGAAGAGCATG GCGCACGATCCGCAAGTGCTCGTGAAGCTTTCACGCAACGAGACGTCATATGTGACGGTCGTGGGCGATGTGGCGGAAAA CGCTCGCATGGCTCTGACCGCTCGGGGCGAGCGCCTGCTTGATGCATTGGCGAGCGCAGGCGGGGCGAAGCACCCGGTTG ACAAGGTTACGATCCAGATAACGCGCGGCAAGACGGTGGCCTCGTTGCCGCTCGACATGGTTATTCGTGATCCGCGGCAG AATGTCCCGCTGCATGCGGGCGACGTGGTCACTGTCCTGTTTCAGCCGTATAGCTTTACGGTGCTCGGCGCGACGGGCAA GAATGACGAAATCAATTTTGAAGCGAAGGGCATCACGCTTGCGCAGGCCCTGGCGCGTGCTGGCGGCTTGCAGGATTCGC GCGCCGATGCAAAGGGCGTATTCATCTTCCGACTTGAAGACGCCAACGCGCTGAAATGGCCGACGGCTCCCGTGCGTACG ACTGCGGACGGAAAGGTGCCTGTCGTGTATCGCGTGAATCTTCGCGATCCGAATTCGTTTTTCGTGGCTCAGAGCTTCAG GGTCGACAACAACGATCTGTTGTACGTTTCGAATGCGCCGATTGCCGAACTTCAAAAATTCTTGAATGTCGTGTTCTCCG TTGCGTATCCGGTGATTACCGGCGTTCAGACAGTCAGGTACTGA Protein sequence : MSRPFCKTFLIACVMGAVTLAGCSSIPTSGASGAQIARAAQSPSGIQIVDVTEDVARQLFADRNTADFVTALGGGASFRQ QLGVGDTIQVSIWEAPPATLFGAAQSEGSSGPANARVTVLPDQAIDGDGNVNIPFAGQVKAAGRSPTQLAREIAARLKSM AHDPQVLVKLSRNETSYVTVVGDVAENARMALTARGERLLDALASAGGAKHPVDKVTIQITRGKTVASLPLDMVIRDPRQ NVPLHAGDVVTVLFQPYSFTVLGATGKNDEINFEAKGITLAQALARAGGLQDSRADAKGVFIFRLEDANALKWPTAPVRT TADGKVPVVYRVNLRDPNSFFVAQSFRVDNNDLLYVSNAPIAELQKFLNVVFSVAYPVITGVQTVRY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ctrA | NP_273135.1 | capsule polysaccharide export outer membrane protein | Not tested | IHT-A | Protein | 9e-66 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wcbC | YP_109402.1 | capsular polysaccharide biosynthesis/export protein | VFG2566 | Protein | 1e-172 | 100 |
| wcbC | YP_109402.1 | capsular polysaccharide biosynthesis/export protein | VFG0255 | Protein | 4e-66 | 42 |
