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Name : wcbD (BPSL2806) Accession : YP_109401.1 Strain : Genome accession: NC_006350 Putative virulence/resistance : Virulence Product : capsule polysaccharide export ABC transporter transmembrane protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3524 EC number : - Position : 3353701 - 3354849 bp Length : 1149 bp Strand : - Note : Similar to Haemophilus influenzae capsule polysaccharide export inner-membrane protein BexC SWALL:BEXC_HAEIN (SWALL:P22930) (377 aa) fasta scores: E(): 7.1e-55, 41.99% id in 381 aa. Identical to Burkholderia mallei capsule polysaccharide export inner-memb DNA sequence : ATGGAGAGCTTCGATGCTCCGGCGCAGGAGTCGTCATGGTTCTGGCGGGTATGGACGATCGGGCGGCTGAGGCTGACCCC GTTGTTTCTGGTGACGGTGGTGCTGCCGACTGCAATCGCTACCCTCTACTACGGGCTGATTGCGTCGGATGTCTACATCT CGGAATCGCAGTTTATCCTGCGTACGCCCAAGCGAACGAGCGAACCGGGTTTGGGGGCATTGCTTCAGGGCGTCTCCCTA TCAAAGACCAGTGACGACACCAGTGTCGTTCAAGATTACATAAAGTCGAGAGACGCACTCGTCGTTCTCGAGCAGAAAAT GCCGCTCAGAGATGCATTTGGCGGTCGCTATGCTGATATCTTCAGTCGATTCCCGGGCGTGATCGGGCGCGATGGCTTCG AGTATTTCTACCGCTATTTCAAAAACCATGTTGCCGTCGACGTAGGGACTGCAACTGCGGTCACTACGCTACGCGTTCAG GCCTATACGTCGAAAGACGCATACCTGATCAACAAGTATTTGCTCGAGATGGCGGAGAAGCGAGTCAATGAACTCAACGA TCGCTCACGTCAGGATTCGCTCCGTTACGCCCTTGCGGAGGTGGCGGGAGCGGAAGCGAAGGTAAAGGCTGCGTCGACGG CGTTGTCGAAATTCCGAAGCAAGGCGAGTCTGTTCGATCCGGATCGGCAGTCCAATATCCAACTGGAACTGGTAGCGAAG TTGCGGGGCGAGCTCATTGCCAAGCAGGCGCAGCTATCGCAATTGCGCATGCTCAGCCCGCAGAATCCGCAGATCCCGAG TCTGGCCGCGTCTATCGGCGCGTTGGAAGCGTCGATTGCGAGCGAGAAAGGGGGCGTGGCGGGAGAGAAGAATTCGTTGT CGGACCGTTCGGTCGAGTACCAGCGCCTGGCTTTGGAGCAATCGTTCGGGGAGAAGCTTCTTGCCTCTGCGCTGACATCG TTGGAGCAAGCCAGGGCAGATGCGGAAAGAAAACAAATCTATCTGGAACGGGTTGCGGAACCGAACGAACCGGACGTGGC GATGGAACCCAAGCGTGTCCGGAACATATTTGCCTGTTTCATTTTGGGGCTCGCGGCCTGGGGCGTGTTGAGCATGCTGG TAGCGGGTATTCGTGAACATCAGGAATGA Protein sequence : MESFDAPAQESSWFWRVWTIGRLRLTPLFLVTVVLPTAIATLYYGLIASDVYISESQFILRTPKRTSEPGLGALLQGVSL SKTSDDTSVVQDYIKSRDALVVLEQKMPLRDAFGGRYADIFSRFPGVIGRDGFEYFYRYFKNHVAVDVGTATAVTTLRVQ AYTSKDAYLINKYLLEMAEKRVNELNDRSRQDSLRYALAEVAGAEAKVKAASTALSKFRSKASLFDPDRQSNIQLELVAK LRGELIAKQAQLSQLRMLSPQNPQIPSLAASIGALEASIASEKGGVAGEKNSLSDRSVEYQRLALEQSFGEKLLASALTS LEQARADAERKQIYLERVAEPNEPDVAMEPKRVRNIFACFILGLAAWGVLSMLVAGIREHQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ctrB | NP_273136.1 | capsule polysaccharide export inner-membrane protein | Not tested | IHT-A | Protein | 2e-56 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wcbD | YP_109401.1 | capsule polysaccharide export ABC transporter transmembrane protein | VFG2565 | Protein | 2e-149 | 100 |
| wcbD | YP_109401.1 | capsule polysaccharide export ABC transporter transmembrane protein | VFG0698 | Protein | 5e-63 | 43 |
| wcbD | YP_109401.1 | capsule polysaccharide export ABC transporter transmembrane protein | VFG0686 | Protein | 5e-63 | 43 |
| wcbD | YP_109401.1 | capsule polysaccharide export ABC transporter transmembrane protein | VFG0256 | Protein | 7e-57 | 42 |
