Gene Information

Name : glnA (BPSL2318)
Accession : YP_108914.1
Strain :
Genome accession: NC_006350
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 2799520 - 2800935 bp
Length : 1416 bp
Strand : -
Note : Similar to Escherichia coli glutamine synthetase GlnA SWALL:GLNA_ECOLI (SWALL:P06711) (468 aa) fasta scores: E(): 3.4e-133, 65.51% id in 464 aa, and to Ralstonia solanacearum probable glutamine synthetase rsc1258 or rs02774 SWALL:Q8XZY7 (EMBL:AL646063) (4

DNA sequence :
ATGAGTAAAACCGTCGCCGACGTCATGCAGCTCGCGAAGGACGAGGACGTCAAGTTTGTCGATTTCCGCTTCACGGACAC
GCGCGGCAAGGAGCAACACGTGTCGGTGCCGGTGTCGGCCTTCGGCGAGGACAAGTTCGAAAGCGGCCACGCGTTCGACG
GCTCGTCGATCGCGGGCTGGAAGGGCATCGAGGCGTCGGACATGCTGCTCATGCCGGATCCGAACGCGGCCTTCATCGAC
CCGTTCTACGAAGAGTCGACCCTCGTGCTGACCTGCGATGTCGTCGAGCCGGCGGACGGCAAGGGCTACGAGCGCGATCC
GCGCTCGCTCGCGAAGCGCGCCGAGGCCTACCTGAAGAGCACGGGCATCGGCGACACCGCGTACTTCGGTCCGGAGCCGG
AATTCTTCATTTTCGACTCGGTGCAGTGGAACACGGACATGTCCGGCTGCTTCGTGAAGATCAACTCGGAAGAAGCGCCG
TGGTCGTCGGCGAAGGAATTCGAAGGCGGCAACACGGGCCACCGTCCGGGCGTGAAGGGCGGCTACTTCCCGGTTGCGCC
GGTCGACCAGTTCCAGGACATGCGCTCGGAAATGTGTCTGCTGCTCGAGCAGATCGGCATTCCGGTCGAAGTGCACCACC
ACGAGGTGGCGGGCCAGGGCCAGAACGAAATCGGCACGAAGTTCTCGACGCTCGTCGAGCGCGCGGACTGGACGCAATGG
GCGAAGTACATCATCCATAACGTCGCGCACTCGTACGGCAAGACGGCGACGTTCATGCCGAAGCCCGTCGTCGGCGACAA
CGGCTCGGGCATGCACGTGCACCAGTCGATCTGGAAGGACGGCCAGAACCTGTTCGCGGGCAACGGCTACGCGGGCCTGT
CGGAGACGGCGCTCTTCTACATCGGCGGCATCATCAAGCACGCGCGCGCGCTGAACGCGATCACGAACCCGACGACGAAC
TCGTACAAGCGTCTCGTGCCGCACTTCGAAGCGCCCGTGAAGCTCGCCTACTCGGCGCGCAACCGCTCGGCGTCGATCCG
CATTCCGCACGTGTCGAACCCGAAGGGCCGCCGCATCGAAACGCGCTTCCCGGACCCGATGGCGAACCCGTACCTGTGCT
TCTCGGCGCTGATGATGGCGGGTCTCGACGGCATCCAGAACAAGATCCATCCGGGCGAGGCCGCGGACAAGAACCTGTAC
GACCTGCCGCCGGAAGAGGATGCGAAGATCCCGACCGTGTGCGCCGGCCTCGACCAGGCGCTCGAAGCGCTCGACAAGGA
CCGCGAGTTCCTGACGCGCGGCGGCGTGTTCACGGACGCGATGATCGACGCGTACCTGGGCCTGAAGGAGCAGGAGCTCG
CGAAGTTCCGCATGACGACGCACCCGATCGAGTTCGAGATGTACTACTCGCTGTAA

Protein sequence :
MSKTVADVMQLAKDEDVKFVDFRFTDTRGKEQHVSVPVSAFGEDKFESGHAFDGSSIAGWKGIEASDMLLMPDPNAAFID
PFYEESTLVLTCDVVEPADGKGYERDPRSLAKRAEAYLKSTGIGDTAYFGPEPEFFIFDSVQWNTDMSGCFVKINSEEAP
WSSAKEFEGGNTGHRPGVKGGYFPVAPVDQFQDMRSEMCLLLEQIGIPVEVHHHEVAGQGQNEIGTKFSTLVERADWTQW
AKYIIHNVAHSYGKTATFMPKPVVGDNGSGMHVHQSIWKDGQNLFAGNGYAGLSETALFYIGGIIKHARALNAITNPTTN
SYKRLVPHFEAPVKLAYSARNRSASIRIPHVSNPKGRRIETRFPDPMANPYLCFSALMMAGLDGIQNKIHPGEAADKNLY
DLPPEEDAKIPTVCAGLDQALEALDKDREFLTRGGVFTDAMIDAYLGLKEQELAKFRMTTHPIEFEMYYSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-102 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_108914.1 glutamine synthetase VFG1399 Protein 2e-107 52