Gene Information

Name : lolD (BPSL2276)
Accession : YP_108872.1
Strain :
Genome accession: NC_006350
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2742128 - 2742850 bp
Length : 723 bp
Strand : -
Note : Similar to Escherichia coli lipoprotein releasing system ATP-binding protein LolD SWALL:LOLD_ECOLI (SWALL:P75957) (233 aa) fasta scores: E(): 4.5e-38, 56.75% id in 222 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa2

DNA sequence : 
ATGAATCAGAACCATCAGGATGGCGGCGCGCGCGAATGCGTGCTGGAAGCGCGCGGCGTCACGAAGACGTTCGTGCAGGG
CGGCTTCAACGTACAGGTGCTCGACAACGCGCAGGTGTCGGTGCGCCGCGGCGAGAAGCTCGCGATCGTCGGCGCGTCGG
GCTCGGGCAAGAGCACGCTGCTGCACGTGCTGGGCGGGCTCGACGAGCCGAGCGCGGGACAGGTGTCGCTGCTCGGCAAG
CCGTTCACGCAGCTCGCCGAGCGCGAGCGCAACGAGCTGCGCAATCGCGCGCTCGGCTTCGTCTATCAGTTCCACCATCT
GCTGCCGGAATTCACCGCGCTCGACAACGTCGCGATGCCGCTCCGAATCCGCCGGATGTCGACCGAGGAGGCGCGCCGCC
ATGCGCGCGAGATGCTCGAGCAGGTGGGGCTCGGCGCGCGCGCGAAGCATCGCCCGGGCGAGCTGTCGGGCGGCGAGCGC
CAGCGCGTCGCGATCGCGCGCGCGCTCGTGACCAAGCCCGCTTGCGTGCTCGCCGACGAGCCGACCGGCAACCTCGACGG
CTCGACCGCCGATCATGTGTTCCACCTGATGCTCGAGCTGTCGCGAACGCTCGACACGAGCTTCGTGATCGTCACGCACG
ATCCCGATCTCGCCGCGCGCTGCGACCGCATCCTGCGGCTGCGCGACGGCGTGCTGCACGAGGAGCCGGCCGTGCCGGTG
TGA

Protein sequence : 
MNQNHQDGGARECVLEARGVTKTFVQGGFNVQVLDNAQVSVRRGEKLAIVGASGSGKSTLLHVLGGLDEPSAGQVSLLGK
PFTQLAERERNELRNRALGFVYQFHHLLPEFTALDNVAMPLRIRRMSTEEARRHAREMLEQVGLGARAKHRPGELSGGER
QRVAIARALVTKPACVLADEPTGNLDGSTADHVFHLMLELSRTLDTSFVIVTHDPDLAARCDRILRLRDGVLHEEPAVPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-28 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-29 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_108872.1 lipoprotein releasing system ATP-binding protein NC_008702.1.4606598. Protein 2e-30 44
lolD YP_108872.1 lipoprotein releasing system ATP-binding protein NC_012469.1.7686878. Protein 8e-36 42