Gene Information

Name : ldcA (BPSL2122)
Accession : YP_108719.1
Strain :
Genome accession: NC_006350
Putative virulence/resistance : Unknown
Product : L,D-carboxypeptidase A
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1619
EC number : 3.4.17.13
Position : 2549191 - 2550132 bp
Length : 942 bp
Strand : -
Note : catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine

DNA sequence :
ATGATTTCCACGCCCTGCACGCCGCGCACGATTCGTCTGCTTGCCCCGTCCGGTTATCCGCACGATCCCGCCGCGATCGA
GCGCGCGCTCGAACGCCTGAGCGACGAGCAGCATCGAATCCAGAATCTCGACGCGACGCAACGCCGCTATCAGCGCTTCG
CCGGCACCGACGGCGAGCGGGCAGGCGACCTGAACCGGCTTGCGGACCCGTCGTTGCCGCTGCCCGACATCGGCCTCGCG
GTGCGCGGCGGCTACGGCGCCGCGCGGATCCTGCACGGGCTCGACTATCGCGGCCTCGAACGCCGGCTGCGCGACCAGCC
GATCGCGCTCGTCGGCCACAGCGACTTCACCGCGATCCAGCTCGCGCTCTATGCGAAGGCGCGCGTGAAGACGTTCGGCG
GCCCGATGCTGTCGGCCGATTTCGGCGCGCCGACGCCGAGCGAGTTCACGCTTGCGCATTTCTGGCAGACCCTCACGCAG
CCGACGACGACGATCGTTTCCGACGTGCCGCAGACGCAGGTCGTCAACGCATCGGGCACGCTATGGGGCGGCAATCTCGC
GATCCTCGCGTCGCTCGTCGGCACGCCGTACATGCCGCAGATCGAAGGGGGGATCCTGTTCGTCGAGGATGTGAACGAGC
AGCCGTTCAGGATCGAGCGGATGATCTATCAGCTGCATCTCGCGGGCATCCTCGCACGCCAGCAGGCGCTCGTGCTCGGC
CAGTTCACGGGCGCGCGCCCGTTCGATTACGACAACGGCTACGACATGCAGGCGATGATCGAGCAGGTGCGCGGCGTGAT
CGGCATCCCGATCGTCACCGGGTTGCAGTTCGGTCACGTGCCCGATCTGCTGACGCTGCCGTTCGGCGCGCGCGCGGAGC
TCGTCGCGAACGAGCACGGTTTCAGGCTGACGATGTCCGACTATCCGCATCTCGCCGCATGA

Protein sequence :
MISTPCTPRTIRLLAPSGYPHDPAAIERALERLSDEQHRIQNLDATQRRYQRFAGTDGERAGDLNRLADPSLPLPDIGLA
VRGGYGAARILHGLDYRGLERRLRDQPIALVGHSDFTAIQLALYAKARVKTFGGPMLSADFGAPTPSEFTLAHFWQTLTQ
PTTTIVSDVPQTQVVNASGTLWGGNLAILASLVGTPYMPQIEGGILFVEDVNEQPFRIERMIYQLHLAGILARQQALVLG
QFTGARPFDYDNGYDMQAMIEQVRGVIGIPIVTGLQFGHVPDLLTLPFGARAELVANEHGFRLTMSDYPHLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
f304 AAC61707.1 F304 Not tested PAI I CFT073 Protein 1e-66 49