Gene Information

Name : BPSL0171 (BPSL0171)
Accession : YP_106799.1
Strain :
Genome accession: NC_006350
Putative virulence/resistance : Unknown
Product : phage capsid scaffolding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 174685 - 175494 bp
Length : 810 bp
Strand : -
Note : Similar to bacteriophage P2 presumed capsid scaffolding protein O SWALL:VPO_BPP2 (SWALL:P25478) (284 aa) fasta scores: E(): 3e-24, 43.44% id in 290 aa, and to bacteriophage phi CTX protein SWALL:Q9ZXM4 (EMBL:AB008550) (273 aa) fasta scores: E(): 9e-31, 44

DNA sequence : 
ATGGCAAGCAAAACCAAATTCTTCCGCGTCGCAGTGGAAGGCGCGACCGTCGACGGTCGCGAGATCAAGCGTGAATGGCT
CACGCAGATGGCGAAGCACTACGACCCGAAGCTGTACGGCGCACGCGTGAACGTCGAGCACATCAAGGGCTGGGCGCCGC
TGTCGGCGAACAACCCGTTCGGCGCGTATGGCGACGTGATCGCGCTGAAGGCGGCCGAAATCGAAGACGGCCCGCTGAAA
GGGAAGATGGCGCTGTATGCGCAGATCGATCCGACCGACGAGCTCGTCGCGCTGTCGAAGAAGCGCCAGAAGCTCTTCAC
GTCGATCGAGATCAACCCCGACTTCGCCGACATCGGCGAGGCGTATCTCGTCGGGCTCGCGGCGACCGACGACCCGGCGA
GCCTCGGCACCGAAGCGCTGCAATTCGCCGCGAAGCGCTCGAACAACCTCTATACGCCCGCGTGCGAGACGGCGATCGAA
TTCGAAGGCGCGGCCGAAACGGCCGGCCTCAAGGAATGGGTAAAGGGCCTGTTCGCCCGCAACCGCGAGAACGACGACGA
GCGCTTCGCCGACGTGCGCGAAGCGCTCGAGCGGGTCGCCATCCATGCGCACCACACGGGCCGCGAAGTCGCGACGCTGA
GCACGGCTGTCACGAGCGCGACGGGCGCCGCAGCCGACGCGAAGAAGCGCGCCGATGAAGCCTTCGCCGCCGTCGAAGCG
CTGACCGAGAAGCTGTCGAACACCGACAACGGCGCGCCGCAGCGCCCGCCGTCGACCGGCTCGACGGGCGAGCTCGTGAC
CGACTGCTGA

Protein sequence : 
MASKTKFFRVAVEGATVDGREIKREWLTQMAKHYDPKLYGARVNVEHIKGWAPLSANNPFGAYGDVIALKAAEIEDGPLK
GKMALYAQIDPTDELVALSKKRQKLFTSIEINPDFADIGEAYLVGLAATDDPASLGTEALQFAAKRSNNLYTPACETAIE
FEGAAETAGLKEWVKGLFARNRENDDERFADVREALERVAIHAHHTGREVATLSTAVTSATGAAADAKKRADEAFAAVEA
LTEKLSNTDNGAPQRPPSTGSTGELVTDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t4320 NP_807915.1 capsid protein Not tested SPI-7 Protein 3e-49 53
STY4626 NP_458708.1 putative capsid protein Not tested SPI-7 Protein 3e-49 53
unnamed ABR13465.1 putative capsid scaffold Not tested PAGI-6 Protein 2e-42 42