Gene Information

Name : BPSL1696 (BPSL1696)
Accession : YP_108301.1
Strain :
Genome accession: NC_006350
Putative virulence/resistance : Virulence
Product : recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 1975293 - 1975937 bp
Length : 645 bp
Strand : +
Note : Similar to Xylella fastidiosa recombinase xfa0019 SWALL:Q9PHI6 (EMBL:AE003851) (188 aa) fasta scores: E(): 5.3e-29, 49.73% id in 189 aa, and to Bacteriophage Mu DNA-invertase Gin or 51 SWALL:DNIV_BPMU (SWALL:P03015) (193 aa) fasta scores: E(): 6.8e-28, 48

DNA sequence :
TTGCAATGCTCAGTCAAGCCTGAGGTCACGATGCGTATCGGCTATGCGCGCGTATCGACCGAGGAACAATGCCTTGCGCT
GCAAGAGGATGCTTTGACTCGAGCAGGATGTGACTTGATTTTCAGCGACCACGGCATTTCGGGCACCAATTTCTGCCGAC
CTGGCCTCGATCAAGCCCTCCAACACCTTGGACGAGGCGATACTTTGGTCGTTTGGCGTCTCGATCGACTCGGACGTTCG
CTGACCAAACTCGTCGACATGATCGATTTATTGGGCCAACGCGATATCCATTTTGAATCGCTAACAGAATCGATCAATAC
ACAATCACCGAGTGGCACGCTGATTTTTCATATCATTGCTGCGCTCGCACAGTTCGAGCGTGCGTTGATCAGCGAGCGGA
CGCGTGCGGGTCTCGCGGCAGCAAAGAACCGTGGTGTACGTGTGGGGCGGCCAAGGTCGCTCACCGAATATCAAGCAAGT
CAGGCAATTCGCCTATTGTCGGAACGCTCGATCGCCGCAGTTGCGAAGGAATTTGGTGTGCATCCGCAGACACTTAGGCG
ATTGTGGGCAATCCATAAGCGGCACACAGAATCCGCAGGTGAATTTAACGAATCGAGTACATCACCGTGCGTCAAAGACG
AATGA

Protein sequence :
MQCSVKPEVTMRIGYARVSTEEQCLALQEDALTRAGCDLIFSDHGISGTNFCRPGLDQALQHLGRGDTLVVWRLDRLGRS
LTKLVDMIDLLGQRDIHFESLTESINTQSPSGTLIFHIIAALAQFERALISERTRAGLAAAKNRGVRVGRPRSLTEYQAS
QAIRLLSERSIAAVAKEFGVHPQTLRRLWAIHKRHTESAGEFNESSTSPCVKDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 3e-36 53
res AGF34985.1 resolvase Not tested SGI1 Protein 3e-36 53
res AGF35025.1 resolvase Not tested SGI1 Protein 3e-36 53
res AGF35059.1 resolvase Not tested SGI1 Protein 3e-36 53
res AGK06929.1 resolvase Not tested SGI1 Protein 3e-36 53
res AGK06966.1 resolvase Not tested SGI1 Protein 3e-36 53
res AGK07012.1 resolvase Not tested SGI1 Protein 3e-36 53
res AGK07070.1 resolvase Not tested SGI1 Protein 3e-36 53
res AAK02044.1 resolvase Not tested SGI1 Protein 3e-36 53
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 4e-29 50
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 1e-30 47
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 1e-30 47
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 1e-30 47
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 7e-26 47
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 1e-25 47
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 1e-25 47
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 4e-18 41
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 4e-18 41
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 5e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPSL1696 YP_108301.1 recombinase VFG1030 Protein 2e-18 41