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Name : gabD (BPSL1654) Accession : YP_108264.1 Strain : Genome accession: NC_006350 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 1916230 - 1917690 bp Length : 1461 bp Strand : + Note : NADP+; Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD or b2661 SWALL:GABD_ECOLI (SWALL:P25526) (482 aa) fasta scores: E(): 2e-126, 66.45% id in 480 aa, and to Pseudomonas aeruginosa succinate-semialdehyde dehydrogenase pa026 DNA sequence : ATGTATCTCGAACACGCATTGAAGGACCCCTCGCTGTTGAGGCATCAAGCGTATATCGGCGGTGAATGGCAAGCCGCGGA TTCTGACGCCACGTTCGAAGTCTTCGACCCGGCAACGGGAGAATCCCTTGGTACCGTGCCGAAAATGGGGGCGGCGGAAA CGGCGCGTGCCATCGAGGCAGCTCAAGCCGCGTGGGCCGGCTGGCGCATGAAGACGGCGAAAGAGCGCGCGGCCATCCTG CGTCGCTGGTTCGACCTGGTGATCGCGAACAGCGACGATCTCGCGCTGATTCTCACCACTGAGCAGGGCAAGCCGCTCGC GGAAGCCAAGGGCGAGATCGCTTACGCAGCCTCGTTCATCGAATGGTTTGCCGAAGAAGGCAAGCGCGTCGCCGGGGATA CGCTTCCCACACCTGACGCGAACAAGCGGATCGTCGTCGTCAAGGAGCCGATCGGTGTCTGCGCTGCCATCACACCGTGG AATTTCCCCGCCGCCATGATTGCGCGGAAGGTAGGGCCGGCCCTCGCTGCCGGTTGTCCGATCGTCGTCAAGCCCGCCGA GTCGACTCCGTTCTCCGCGCTTGCCATGGCGTTTTTGGCTGAACGTGCAGGCGTTCCGAAAGGCGTGCTAAGTGTCGTCA TCGGCGACCCGAAAGCGATCGGCACCGAGATAACGAGCAATCCCATCGTCCGAAAGCTGTCGTTCACGGGGTCCACGGCG GTCGGCCGATTGTTGATGGCTCAGAGCGCCCCGACGGTGAAGAAACTCACGCTCGAGTTGGGCGGAAATGCTCCATTCAT TGTCTTCGACGATGCCGATCTCGATGCAGCCGTCGAAGGCGCCATCGCATCGAAATACCGCAACAACGGGCAAACGTGCG TCTGTACCAACCGCTTTTTCGTACACGAGCGTGTCTACGATGCGTTCGCGGACAAGCTCGCGGCGGCCGTGAGCAAGCTC AAGGTCGGACGCGGAACCGAGAGCGGAGCGACGCTCGGGCCGCTGATCAACGAGGCGGCGGTGAAGAAGGTGGAATCGCA CATTGCCGATGCGCTTGCTAAAGGCGCCTCGCTCATGACGGGCGGCAAGCGGCACGCATTGGGGCACGGTTTTTTCGAAC CGACGGTATTGACCGGCGTGAAGCCGGATATGGATGTGGCGAAAGAGGAGACGTTCGGCCCGCTCGCACCGTTGTTCCGG TTTGCGTCGGAGGAAGAATTGGTGCGCCTTGCCAACGATACGGAGTTCGGCCTTGCCGCTTATTTATACAGCCGCGATAT CGGTCGAGTTTGGCGCGTTGCCGAGGCCCTTGAATACGGCATGGTCGGGATCAATACGGGGCTCATTTCAAACGAAGTCG CGCCGTTCGGCGGTGTCAAGCAATCTGGGCTAGGCCGAGAAGGATCGCATTACGGTATCGACGACTATGTCGTGATCAAG TATTTGTGCGTCGCTGTTTGA Protein sequence : MYLEHALKDPSLLRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAIL RRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPW NFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTA VGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKL KVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFR FASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIK YLCVAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-148 | 67 |
