Gene Information

Name : BPSL1412 (BPSL1412)
Accession : YP_108034.1
Strain :
Genome accession: NC_006350
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1643853 - 1644578 bp
Length : 726 bp
Strand : +
Note : Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1718 or rs02908 SWALL:Q8XYP0 (EMBL:AL646066) (236 aa) fasta scores: E(): 6.9e-47, 69.81% id in 222 aa, and to Escherichia coli lipoprotein releasing system ATP-binding prote

DNA sequence :
GTGCGTTTCATGCTCAAGATTACCGATCCAATCATCGAAGTACGGAATGTGTGCAAGCGTGTCGCCGATGCCGCCGGCGA
GCTGACGATTCTCGCTGGCATCGACCTGACGGTTCGCGCGGGCGAGAGCGTCGCGATCGTCGGCGCGTCCGGCTCGGGCA
AGTCGACGCTGCTCGGCCTGCTCGCCGGCTTGGACAGCGCGACCGAGGGCACGGTTCGCCTGTTCGGCCAGAATCTCGGC
CGGCTCGACGAGGATGCGCGCGCGGCGTTGCGCAATGGCGCGGTGGGCTTCGTGTTCCAGTCGTTCCAGTTGATGCCGCA
TTTGAGCGCGCTCGAGAATGTGATGCTGCCGCTCGAGCTGCAGGGCGGCGTCGGTGCGCGCGAGGCCGCGCAGCGCGCGC
GTGCGCTGCTCGAAGAAGTCGGGCTCGGCGCACGCACGGGGCATTATCCGAAGCTGCTGTCGGGCGGCGAGCAGCAGCGC
GTCGCGCTCGCGCGCGCGTTCGTCACGCGGCCGGCGTTGCTGTTCGCCGACGAGCCCACGGGTAGTCTCGATGCGGCGAC
GGGCGAGGCGGTCATCGATCTGATGTTCGAACTCAATCGCGCGCACGGCGCGACGCTCGTGCTCGTCACGCACGATACGG
AACTCGCGCGCCGCTGCGGGGCGACGATCGTGCTCGAGGCGGGGCGTCTGCGCGGTGCGGACCGCGCGCGGCAGGAAGCG
GGCTGA

Protein sequence :
MRFMLKITDPIIEVRNVCKRVADAAGELTILAGIDLTVRAGESVAIVGASGSGKSTLLGLLAGLDSATEGTVRLFGQNLG
RLDEDARAALRNGAVGFVFQSFQLMPHLSALENVMLPLELQGGVGAREAAQRARALLEEVGLGARTGHYPKLLSGGEQQR
VALARAFVTRPALLFADEPTGSLDAATGEAVIDLMFELNRAHGATLVLVTHDTELARRCGATIVLEAGRLRGADRARQEA
G

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-19 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-20 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-20 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-20 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPSL1412 YP_108034.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-25 47
BPSL1412 YP_108034.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-23 43