Gene Information

Name : BMAA1984 (BMAA1984)
Accession : YP_338545.1
Strain :
Genome accession: NC_006349
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 2172747 - 2173715 bp
Length : 969 bp
Strand : +
Note : identified by match to protein family HMM PF00158; match to protein family HMM TIGR01199

DNA sequence :
ATGTCGCAACACAGCAGTGACGGCAGACGGCTGCACGGCAATTCGTGTCTGATCCAGGCGCTGTTGCACAAGATCGAAAA
AGTGGCCGCGACTCGTGCAAGCGTGTTGATCGTCGGCGAAAGCGGGGTCGGCAAAGATATCGTCGCAAGACTCCTCCATG
ACATGAGCCCACGCCGCCGTGGCCCGTTCGTTCCGGTCAATTGCGGCGCGATTCCGGCCGACATCGCCGAATCGCAGTTG
TTCGGCCACGAGAAGGGCAGCTTCACCGGCGCGGCCGCGCAGCACATCGGCTTCTTCGAGGCCGCGCGCGGCGGCACGAT
CTTCCTCGACGAAGTGGCCGAGATGTCGCGCGATCTGCAGGTGAAGCTGCTGCGCGCGCTCGAATCGAACACCATCACGC
GCGTGGGCGGCAGCGAGCCGATCGCGCTCGACGTGCGCGTGGTCGCGGCCACTCACCACAACCCTGCCGAGGCGGTGCAG
GAAGGGCGCTTTCGCGAAGACCTGTTCTACCGGCTCGCCGTGTTCGCGCTGCGCGTGCCGGCGCTCAGGCATCGCGAGGA
CGATATCGAGGGCATCGCGCAGGAGCTCGTCGATACGCTCAACAGCCGGCACAGCACGCGCAAGCGGCTCTCGGGGCAGG
CGCTGAAGACGCTGCGCACCTATTCGTGGCCGGGCAACGTGCGCGAGCTGCGCAATGCGATCGAGCGCGCGTACATCCTC
TCCGACGAGCAAATCGAGCAGTTGCCGGTGCGACGGCTCGCGCCGCGCGACGACGTGCGCCGGAACGCGATGACGCTGCC
GCTCGGCATGACGCTCGCGCATTCGCAGCAGCGCTTCATCGCCGCGTCGCTCAAGTACTTCGACGGCGACAAGCCGCGCA
CCGCGAAGGCGCTCGGCATCAGCCTGAAGACGCTGTACAACCGGCTCGCGCTGATGCGCGAGCACGACGGGGAAACCGCG
CAGCACTAA

Protein sequence :
MSQHSSDGRRLHGNSCLIQALLHKIEKVAATRASVLIVGESGVGKDIVARLLHDMSPRRRGPFVPVNCGAIPADIAESQL
FGHEKGSFTGAAAQHIGFFEAARGGTIFLDEVAEMSRDLQVKLLRALESNTITRVGGSEPIALDVRVVAATHHNPAEAVQ
EGRFREDLFYRLAVFALRVPALRHREDDIEGIAQELVDTLNSRHSTRKRLSGQALKTLRTYSWPGNVRELRNAIERAYIL
SDEQIEQLPVRRLAPRDDVRRNAMTLPLGMTLAHSQQRFIAASLKYFDGDKPRTAKALGISLKTLYNRLALMREHDGETA
QH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpR NP_791206.1 type III transcriptional regulator HrpR Virulence Hrp PAI Protein 6e-41 41
hrpR AAC34752.1 HrpR Virulence Hrp PAI Protein 4e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BMAA1984 YP_338545.1 Fis family transcriptional regulator VFG1214 Protein 1e-57 43