Gene Information

Name : BMA0308 (BMA0308)
Accession : YP_102132.1
Strain :
Genome accession: NC_006348
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 323739 - 324401 bp
Length : 663 bp
Strand : +
Note : identified by similarity to SP:P22104; match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGCGGATATTGCTGGTTGAAGACGATCGGATGATCGCCGAAGGCGTGCGCAAGGCGCTGAAGGCCGACGGCTGCGCGGT
CGACTGGGTGCAGGACGGCGACGCGGCGCTCACCGCGCTCGGCGGCGAGGCGTACGATCTGCTGCTGCTCGATCTCGGGC
TGCCCAAGCGCGACGGCATCGACGTGCTGCGCACGCTGCGCGCGCGCGGGCTCGCGCTGCCGGTGCTGATCCTCACCGCG
CGCGATGCGGTCGCCGATCGCGTGAAGGGCCTCGACGCGGGCGCCGACGACTATCTCGTCAAGCCGTTCGATCTCGACGA
GCTCGCCGCGCGGATGCGCGCGCTGATCCGCCGCCAGTCGGGGCGCAGCGAATCGATGATCCGGCACGGCGCGCTGACGC
TCGATCCGGCGTCGCATCAGGTGACGCTCGACGGGGCGCCCGTCGCGCTGTCGGCGCGCGAGTTCGCGCTGCTCGAAGCG
CTGCTCGCGCGTCCGGGCGCGGTGCTGTCGAAGAGCCAGCTCGAGGAGAAGATGTACGGCTGGGGCGAGGAGATCGGCAG
CAACACCGTCGAGGTCTATATCCACGCGCTGCGCAAGAAGCTCGGCTCGGACCTGATCCGCAACGTCCGCGGCCTCGGCT
ACATGGTCGTGAAGGAAGCGTAG

Protein sequence : 
MRILLVEDDRMIAEGVRKALKADGCAVDWVQDGDAALTALGGEAYDLLLLDLGLPKRDGIDVLRTLRARGLALPVLILTA
RDAVADRVKGLDAGADDYLVKPFDLDELAARMRALIRRQSGRSESMIRHGALTLDPASHQVTLDGAPVALSAREFALLEA
LLARPGAVLSKSQLEEKMYGWGEEIGSNTVEVYIHALRKKLGSDLIRNVRGLGYMVVKEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-35 51
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-22 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BMA0308 YP_102132.1 DNA-binding response regulator BAC0487 Protein 6e-31 48
BMA0308 YP_102132.1 DNA-binding response regulator BAC0083 Protein 3e-23 45
BMA0308 YP_102132.1 DNA-binding response regulator BAC0197 Protein 8e-27 45
BMA0308 YP_102132.1 DNA-binding response regulator BAC0638 Protein 7e-23 44
BMA0308 YP_102132.1 DNA-binding response regulator NC_002516.2.879194.p Protein 6e-25 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BMA0308 YP_102132.1 DNA-binding response regulator VFG0473 Protein 7e-33 48
BMA0308 YP_102132.1 DNA-binding response regulator VFG1390 Protein 3e-32 47
BMA0308 YP_102132.1 DNA-binding response regulator VFG0596 Protein 1e-22 42
BMA0308 YP_102132.1 DNA-binding response regulator VFG1389 Protein 8e-22 41