Gene Information

Name : fliP (BMA2686)
Accession : YP_104210.1
Strain :
Genome accession: NC_006348
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 2785855 - 2786382 bp
Length : 528 bp
Strand : -
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence : 
GTGCTGTCGCTGCTGCGGCAGGCGATCGGCACCGCGTCGACGCCGCCGAATCAGGTGCTCGTCGGGCTCGCCCTCTTCCT
CACGCTGTTCGTGATGTCGCCCGTGCTCGACCGCGCGTACAACGACGCGTACAAGCCGTTTTCCGAGGGCACGCTGCAGA
TGGACCAGGCGGTGCAGCGCGGCACCGCGCCCTTCAAGGCGTTCATGCTCAAGCAGACGCGCGAGACCGATCTCGCGCTG
TTCGCGAAGATCTCGAAGGCCGCGCCGATGCAGGGGCCGGAGGACGTGCCGCTGTCGCTGCTCGTGCCGGCGTTCGTCAC
AAGCGAGCTGAAGACGGGGTTCCAGATCGGCTTCACGATCTTCATCCCGTTTCTCATCATCGACATGGTTGTCGCGAGCG
TGCTGATGTCGATGGGGATGATGATGGTGTCGCCCGCGACGGTGTCGCTGCCGTTCAAGCTGATGCTGTTCGTGCTCGTC
GACGGCTGGCAGTTGCTGATCGGCTCGCTCGCGCAGAGCTTCACCTAG

Protein sequence : 
MLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPVLDRAYNDAYKPFSEGTLQMDQAVQRGTAPFKAFMLKQTRETDLAL
FAKISKAAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTIFIPFLIIDMVVASVLMSMGMMMVSPATVSLPFKLMLFVLV
DGWQLLIGSLAQSFT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 1e-13 43
hrcR AAG33884.1 HrcR Virulence Hrp PAI Protein 8e-14 43
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 3e-23 42
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 4e-23 42
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 4e-23 42
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 3e-23 42
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 1e-23 42
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 1e-23 42
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 2e-11 42
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 2e-11 42
hrcR AAB06005.2 HrcR Virulence Hrp PAI Protein 1e-19 42
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 1e-12 42
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 1e-12 42
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 2e-22 41
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-20 41
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 2e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_104210.1 flagellar biosynthesis protein FliP VFG2338 Protein 6e-53 69
fliP YP_104210.1 flagellar biosynthesis protein FliP VFG2016 Protein 3e-40 56
fliP YP_104210.1 flagellar biosynthesis protein FliP VFG0394 Protein 9e-23 41
fliP YP_104210.1 flagellar biosynthesis protein FliP VFG0188 Protein 3e-23 41