|
Name : serS (BMA2118) Accession : YP_103689.1 Strain : Genome accession: NC_006348 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2204756 - 2206057 bp Length : 1302 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGACATCCAGTTGCTGCGCAAAGACCTCGACGGCGTCGCGAAACGCCTCGCCGATCGCGGCTACCCCCTCGACGT CGCCGCGTTCTCCGCGCTCGAAGCGGAACGCCGGGCGATCCAGACCCGCACCGAAGAACTGCAGGCGCGCCGCAACAGCC TGTCGAAGCAGATCGGCGCGATGAAGGGGCGGGGCGAGGACACGTCGGCGGTGATGGCCGAGGTGGGCGGCATCGGCGAT GAGATGAAGGCCTCGGCGGTGAAGCTCGACGAGATTCAGGCGCGCCTGTCCGAGCTGATGCTGGAAATGCCGAACGTGCC GCACGAGAGCGTGCCCGTCGGCCGCGACGAGACGGAGAACGTCGAAGTGCGCCGCTGGGGCGCGCCGCGCCAGTTCGATT TCGACGTGAAGGACCACGTCGATGTGGGCACGCCGCTCGGCCTCGATTTCGAGACGGGCGCGAAGCTCTCCGGCGCGCGC TTCACGGTGCTGCGCGGGCCGATCGCGCGCCTGCACCGCGCGCTCGCGCAGTTCATGCTGGACACGCACACGCAGCAGCA CGGCTACAGCGAGACGTACACGCCTTACATCGTGAATCCGGACGTGCTGTACGGCACGGGCCAGTTGCCGAAGTTCGCGG AGGACATGTTCCGCGTCGAGAAGGGCGGCGCGGAGAACACGGTCACGCAATACCTGATCTCGACCTCGGAGATTTCGCTG ACGAACACGGTGCGCGATTCGATCGTCGAAGCGTCCGCGCTGCCGATCAAGCTGACCGCGCATTCGCCGTGCTTCCGCTC GGAGGCGGGCTCGTACGGCCGCGACACGCGCGGGATGATCCGCCAGCACCAGTTCGACAAGGTCGAGATGGTGCAGATCG TCGCGCCGGAAGCATCGTACGCGGCGCTCGACGAGATGGTCGGCCACGCGGAGGCAATCCTGCAGAAGCTCGAACTGCCG TACCGCGTGGTCGCGCTATGCACGGGCGACATGGGTTTCTCGGCGGCGAAGACGTTCGACCTCGAGGTGTGGCTGCCCGC GCAGAACACGTATCGGGAGATCTCGAGCTGCTCGAATACCGAATCGTTCCAGGCGCGCCGCATGCAGGCGCGGTTCCGCA ACGCGCAGGGCAAGCCCGAGCTCGTGCATACGCTGAACGGCTCGGGCCTCGCGGTCGGCCGCACGCTCGTCGCGGTGCTG GAGAACTACCAGAACGCCGACGGCTCGGTGACGGTGCCCGTCGCGTTGCGGCCTTACATGGGCGGCGTCGAGCGGATCGA CGCGCCTTCGAGCGCGGCCTGA Protein sequence : MLDIQLLRKDLDGVAKRLADRGYPLDVAAFSALEAERRAIQTRTEELQARRNSLSKQIGAMKGRGEDTSAVMAEVGGIGD EMKASAVKLDEIQARLSELMLEMPNVPHESVPVGRDETENVEVRRWGAPRQFDFDVKDHVDVGTPLGLDFETGAKLSGAR FTVLRGPIARLHRALAQFMLDTHTQQHGYSETYTPYIVNPDVLYGTGQLPKFAEDMFRVEKGGAENTVTQYLISTSEISL TNTVRDSIVEASALPIKLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIVAPEASYAALDEMVGHAEAILQKLELP YRVVALCTGDMGFSAAKTFDLEVWLPAQNTYREISSCSNTESFQARRMQARFRNAQGKPELVHTLNGSGLAVGRTLVAVL ENYQNADGSVTVPVALRPYMGGVERIDAPSSAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-112 | 58 |
