Gene Information

Name : kdpE (BMA1872)
Accession : YP_103471.1
Strain :
Genome accession: NC_006348
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator KdpE
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1961045 - 1961749 bp
Length : 705 bp
Strand : -
Note : identified by similarity to SP:P21866; match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence :
ATGCCCATGAGTGAACCGACCGTTACCGTCGTCCTGATCGAAGACGAAAAACAGATTCGCCGTTTCGTGCGCAGCGCGCT
CGAGGAAGAGGGGATCGCCGTGTTCGACGCCGAAACGGGCCGCCAGGGCCTGATCGAGGCCGCGACCCGCAAGCCCGATC
TCGCGATCGTCGATCTCGGCCTGCCGGACGGCGACGGCCTCGACGTGATCCGCGAGCTGCGCGGCTGGTCCGAGATGCCG
GTGATCGTGCTGTCGGCGCGCACGCACGAGGAGGAGAAGGTGGCCGCGCTCGACGCCGGCGCGGATGATTACCTGACGAA
GCCGTTCGGCGTATCCGAGCTGCTCGCGCGGATCCGCGCGCATCTGCGGCGGCGCAATCAGGCAGGCGCGGCCGAATCGC
CGGTCGTCAGGTTCGGCGACGTGAGCGTCGACCTCGCGCTGCGGCGGGTATGGCGGGGCGGCGAGGTCGTGCATCTGACG
CCGCTCGAATACCGGCTGCTCGCGACGCTCGTGCGGCACGCGGGCCGCGTGCTCACGCACCGCCAGCTGTTGCGCGACGT
CTGGGGGCCGACGCACGTCGAGAGCCACCACTACCTGCGGATCTACATGGCGCATTTGCGGCAGAAGCTCGAGGCCGACC
CCGCGCAGCCGCAGCACATCGTGACCGAGACGGGCGTCGGTTACCGGCTCGTCGGCGCGGGCTGA

Protein sequence :
MPMSEPTVTVVLIEDEKQIRRFVRSALEEEGIAVFDAETGRQGLIEAATRKPDLAIVDLGLPDGDGLDVIRELRGWSEMP
VIVLSARTHEEEKVAALDAGADDYLTKPFGVSELLARIRAHLRRRNQAGAAESPVVRFGDVSVDLALRRVWRGGEVVHLT
PLEYRLLATLVRHAGRVLTHRQLLRDVWGPTHVESHHYLRIYMAHLRQKLEADPAQPQHIVTETGVGYRLVGAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 6e-30 44
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 8e-30 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE YP_103471.1 DNA-binding response regulator KdpE VFG1390 Protein 5e-26 43