Gene Information

Name : mutS (BMA1671)
Accession : YP_103293.1
Strain :
Genome accession: NC_006348
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 1739693 - 1742368 bp
Length : 2676 bp
Strand : +
Note : This protein performs the mismatch recognition step during the DNA repair process

DNA sequence :
ATGGCCACCCAAATCGACGCCTCCTCCGAAGCAGCAGCGGCTACGGCCGCCGCGCAGCACACGCCGATGATGCAGCAGTA
CCTACGCATCAAGTCGGAGCACCCCGACACGCTCGTGTTCTACCGGATGGGCGACTTCTACGAGCTCTTCTTCGAAGACG
CGGAAAAAGCCGCGCGTCTGCTCGACCTGACGCTCACGCAACGCGGCGCATCCGCCGGCACGCCGATCAAGATGGCGGGC
GTGCCGCATCACGCGGTCGAGCAATACCTCGCGAAGCTCGTGAAATTCGGCGAATCGGCGGCGATCTGCGAACAGATCGG
CGACCCCGCGACGTCGAAAGGCCCCGTCGAGCGCAAGGTCGTGCGCGTCGTGACGCCGGGCACGCTGACCGACGCCGCGC
TGCTGTCCGACAAGAGCGACGTGTTTCTGCTCGCGCTGTGCGTCGGCCACAACAAACGCGGCGTCGCGTCGAACATCGGC
CTCGCCTGGCTCAATCTCGCGAGCGGCGCGCTGCGGCTCGCCGAGCTCGCGCCGGATCAGCTCGGCGCGGCGCTCGAGCG
CATCCGGCCCGCCGAGATTCTCGCGGCCGACGGCACGATCGAATCGGTGCCGGCCGGCATGGGCGCGATCACGCGCGTGC
CCGCGTGGCACTTCGATATCGCGTCGGGCACGCAGCGCCTCTGCGATCAGCTCGAAGTCGCGAGCCTCGACGGCTTCGGC
GCGCAAGCACTCACGAGCGCGAACGGCGCGGCGGGCGCGCTGCTGATCTACGCAGCGGCCACGCAGGGCCAGCAGCTTCG
CCACGTGCGCAGCCTCAAGGTCGAAAACGAATCCGAATACATCGGGCTCGATCCGTCGACGCGGCGCAATCTCGAGCTCA
CCGAGACGCTGCGCGGCACCGAATCGCCGACGCTCTATTCGCTGCTCGACACCTGCTGCACCGCGATGGGCAGCCGCCTG
TTGCGCCATTGGCTGCATCATCCGCCGCGCGCGTCGGTCGCCGCGCAGGCGCGCCATCAGGCAATCGGCGCGCTGCTCGA
CGCCCCCCCGAACGCCGGCCTCGACAGCCTGCGCTCGGCGCTGCGGCAAATCGCCGACGTCGAGCGGATCACCGGCCGCC
TCGCGCTGCTATCCGCGCGGCCACGCGATCTGTCCAGCCTGCGCGACACGTTCGCCGCCCTGCCCGCGCTGCGCGAGCGC
GTTGCCGAGATCGCATCGAACGCGGCCGCGCTCGGCCGCCTCGAAGCCGCGCTCGAGCCGCCGCCCGGTTGCCTCGATCT
GCTCACGCGCGCCATCGCGGCCGAGCCGGCGGCGATGGTGCGCGACGGCGGCGTGATCGCCCGAGGCTACGACGCCGAGC
TCGACGAGTTGCGCGACATTTCGGAGAACTGCGGCCAGTTCCTGATCGATCTCGAAACGCGCGAGCGCGCACGCACCGGC
ATTTCGAACCTGCGCGTCGAGTACAACAAGGTCCACGGTTTCTATATCGAAGTCACGCGCGGCCAGACCGACAAGGTGCC
CGACGACTACCGCCGCCGCCAGACGCTCAAGAACGCCGAGCGCTACATCACGCCCGAGCTGAAGACGTTCGAGGACAAGG
CGCTGTCCGCGCAGGAACGCGCGCTCGCTCGCGAACGCGCGCTGTACGACGGCGTGCTGCAAGCGCTCCTGCCCCATATC
GAGGGTTGCCAGCGCGTCGCAAGCGGCCTCGCCGAACTCGATCTGCTCGCGGCGTTCGCCGAGCGCGCCCGCACGCTCGA
CTGGGTGGCGCCGGAATTCACCGACGAGATCGGCATCGAAATCGATCAGGGCCGCCATCCGGTCGTCGAGGCACAGGTCG
AGCAATTCATCGCGAACGATTGCGCCCTGAACCCCGAGCGAAAGCTGCTCCTCATCACCGGCCCGAACATGGGCGGTAAA
TCGACGTTCATGCGTCAGACCGCGCTCATCGCGCTGATGGCGTACGTCGGCAGCTACGTGCCGGCGAAAGCCGCGCGCTT
CGGCCCCATCGACCGCATCTTCACGCGCATCGGCGCGGCGGACGACCTCGCGGGCGGCCGCTCGACGTTCATGGTCGAAA
TGACGGAGGCCGCCGCGATCCTGAACGACGCAACGCCGCACAGCCTCGTGCTGATGGACGAAATCGGCCGCGGCACATCG
ACGTTCGACGGCCTCGCGCTCGCCTGGGCGATCGCACGCCATCTGCTGTCGCACAACCGCTGCTACACGCTGTTCGCGAC
GCACTACTTCGAGCTCACGCAACTGCCGGCGGAATTCCCGCAGGCGGCGAACGTGCATCTGTCCGCCGTCGAGCACGGTC
ACGGCATCGTATTCCTGCATGCGGTCGAGGAAGGGCCGGCGAATCAGAGCTACGGCCTGCAGGTCGCGCAGTTGGCGGGG
GTTCCCGCGCCGGTGATTCGCGCCGCGCGCAAGCATCTCGCGCACCTCGAACAGCAGTCCGCCGCCCAGGCGACGCCGCA
GCTCGATCTCTTCGCCGCACCACCGGTCGTCGACGAGCCGGAATGCAACGAGCCCCCCGCCGCCGCGACGCCGCACCCCG
CGCTCGAGCGCCTGCTCGAGCTCGATCCGGACGACTTGAAACCGCGCGACGCGCTCGATCTGCTTTACGAACTTCACACA
CTCGCCCGCTCGGGCCCGGCGGATGCGCAACGCTGA

Protein sequence :
MATQIDASSEAAAATAAAQHTPMMQQYLRIKSEHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKMAG
VPHHAVEQYLAKLVKFGESAAICEQIGDPATSKGPVERKVVRVVTPGTLTDAALLSDKSDVFLLALCVGHNKRGVASNIG
LAWLNLASGALRLAELAPDQLGAALERIRPAEILAADGTIESVPAGMGAITRVPAWHFDIASGTQRLCDQLEVASLDGFG
AQALTSANGAAGALLIYAAATQGQQLRHVRSLKVENESEYIGLDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRL
LRHWLHHPPRASVAAQARHQAIGALLDAPPNAGLDSLRSALRQIADVERITGRLALLSARPRDLSSLRDTFAALPALRER
VAEIASNAAALGRLEAALEPPPGCLDLLTRAIAAEPAAMVRDGGVIARGYDAELDELRDISENCGQFLIDLETRERARTG
ISNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPHI
EGCQRVASGLAELDLLAAFAERARTLDWVAPEFTDEIGIEIDQGRHPVVEAQVEQFIANDCALNPERKLLLITGPNMGGK
STFMRQTALIALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLVLMDEIGRGTS
TFDGLALAWAIARHLLSHNRCYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVFLHAVEEGPANQSYGLQVAQLAG
VPAPVIRAARKHLAHLEQQSAAQATPQLDLFAAPPVVDEPECNEPPAAATPHPALERLLELDPDDLKPRDALDLLYELHT
LARSGPADAQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 1e-173 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mutS YP_103293.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 55