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Name : BMA0128 (BMA0128) Accession : YP_101970.1 Strain : Genome accession: NC_006348 Putative virulence/resistance : Unknown Product : portal protein PBSX family Function : - COG functional category : R : General function prediction only COG ID : COG5518 EC number : - Position : 139469 - 140482 bp Length : 1014 bp Strand : + Note : identified by match to protein family HMM PF04860; match to protein family HMM TIGR01540 DNA sequence : TTGAGGAACAGGCCGCGCCAAATCCGAGCGCCGGCGCGTGCCGAGGTCTTCACGTTCGACGATCCGACGCCCGTCATGAA CCGGGCCGAGATTCTCGATTACGTCGAGTGCTGGTCGAACGGCGAATGGTTCGAGCCGCCGGTCAGCTTCGCCGGCCTGG CAAAATCGTTTCGCGCGAGCACGCACCATAGCTCGGCGCTGTTCTTCAAGGCGAACGTGCTGGCGTCGACATTCCGCCCG CACCGCTGGCTGTCGCGGCACGCGTTCGAGCGATGGGCGCTCGATTTCCTGACGTTCGGCAACGGCTATCTGGAACGCCG CCGCAACATGGTCGGCGGCACGCTGCGGCTCGAGCCCGCGCTCGCGAAGTACGTACGGCGCAAGGCCGATTTCAGCGGCT TCGTGTACGTGAACGGCTGGCAGGACCGGCACGAGTTCGCGCCCGACAGCGTGTTCCAGCTCGTGCGGCCGGACATCAAT CAGGAGGTCTATGGCCTGCCTGAGTATCTGAGCTCGCTGCACTCGGCGTGGCTGAACGAATCGTCGACGTTGTTCCGGCG CAAGTATTACGAGAACGGCAGCCACGCCGGCTTCATCCTGTACATGACCGACGCCGCGCAGAAGCAGGACGACGTGGACA ACATGCGCGACGCGCTGAAGAACGCGAAGGGGCCGGGCAACTTCCGCAACGTGTTCATGTACGCGCCGGGCGGGAAGAAG GACGGCATCCAGCTCATTCCCGTGTCCGAGGTCGCCGCGAAGGACGAGTTCTTCAACATCAAGAACGTGACGCGCGATGA CCTGCTCGCCGCGCACCGCGTGCCGCCGCAGTTGCTCGGCATCGTGCCGAGCAATTCGGGCGGGTTCGGCACGCCGGATA CCGCCGCGCGCGTGTTCGGGCGCAATGAAATCAGGCCGCTACAGGCGCGCTTCGCCGAGCTGAACGACTGGCTCGGCGAC GAGGTCGTGACGTTCGACGATTACGAGATTCCGCCGGCGCCGGTCGCGGCGTAG Protein sequence : MRNRPRQIRAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSALFFKANVLASTFRP HRWLSRHAFERWALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKADFSGFVYVNGWQDRHEFAPDSVFQLVRPDIN QEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNMRDALKNAKGPGNFRNVFMYAPGGKK DGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDTAARVFGRNEIRPLQARFAELNDWLGD EVVTFDDYEIPPAPVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 9e-103 | 62 |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 9e-103 | 62 |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 1e-91 | 60 |
