Gene Information

Name : BF3088 (BF3088)
Accession : YP_100367.1
Strain : Bacteroides fragilis YCH46
Genome accession: NC_006347
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3491629 - 3491925 bp
Length : 297 bp
Strand : +
Note : similar to gp:AE016945_141 [Bacteroides thetaiotaomicron VPI-5482], percent identity 80 in 94 aa, BLASTP E(): 2e-42

DNA sequence :
TTGAGCAAAAACCGTATTGATCAGGAAAAGAGAGTAGTAGAGTTGATGATCCGCCTTTACTGCCGTAAAAAAGAAAAGAA
TGTCACGCTTTGCCCCCGGTGCGAAGAGTTGTTGCACTATGCACACGCCCGCCTGGACCACTGTCCCTTCGGGGAGAAAA
AGAAAGCATGCAAGCAGTGCAGCATACACTGCTACAAACCCGCCATGCGGGAACAGATGAGACGGGTGATGCGCTTTTCC
GGTCCCCGGATGCTGATTTACGCTCCTTGGGAGGCAATCAAGCATTTGTTGGGATAG

Protein sequence :
MSKNRIDQEKRVVELMIRLYCRKKEKNVTLCPRCEELLHYAHARLDHCPFGEKKKACKQCSIHCYKPAMREQMRRVMRFS
GPRMLIYAPWEAIKHLLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ygbA YP_217780.1 hypothetical protein Not tested SPI-1 Protein 3e-16 45
ygbA NP_461781.1 hypothetical protein Not tested SPI-1 Protein 2e-16 45
STY2982 NP_457254.1 conserved hypothetical protein Not tested SPI-1 Protein 3e-16 44
ygbA NP_806463.1 hypothetical protein Not tested SPI-1 Protein 3e-16 44