Gene Information

Name : BF2410 (BF2410)
Accession : YP_099693.1
Strain : Bacteroides fragilis YCH46
Genome accession: NC_006347
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2785174 - 2787708 bp
Length : 2535 bp
Strand : -
Note : similar to gp:AE016929_168 [Bacteroides thetaiotaomicron VPI-5482], percent identity 89 in 837 aa, BLASTP E(): 0.0

DNA sequence :
ATGAATAATCAATTCTCACAAAAAGTTTCCGATATTATCGTATATAGCAAAGAAGAGGCAAATCGCCTGAAAAGTAGCTA
TATAGGGCCTGAGCATTTATTGCTTGGTATGCTTCGCGATGGTGAGGGAAAAGCAATCGAGATATTGTCTAAACTCAAAA
CAAACCTGACCGACATAAAGAAGCAGATTGAGGCCATACTGAAAGAGCATGCAGACGACATGCTGTTGCCTGATGCCGAT
GTTCCATTGTCAAATGGAGCTGCAAAGATATTGAAACTATGTATTTTAGAAGCACGAGTGATGAAAAGTCAAGTTGCAGA
TACGGAACATGTACTGCTGGCCATCCTTAAAGATAAGGATAATCTGGCAGCAACGGTTCTTGAAGCGAATCATGTGAATT
ACCAGCAGGTATTCGAACAATTGTCCTTACAGCCGGATATCAGTGCCGGCATGGGATTTACAGAAGATGATGATGATGAA
GAAGAGATGAATCAATCCCGTTCGTCCCATGGATCCGGTGAACGTCAGCAACAGGCGCAGACTGCCTCCAGGAAGCCGAC
TAATGATACTCCGGTGCTTGATAATTTTGGTACTGATATGACTAAGGCCGCCGAGGAAGGCCGTCTTGACCCTGTGGTGG
GACGTGAGCAGGAAATCGAGCGCCTGGCACAGATATTAAGTCGCCGTAAGAAGAATAACCCCATTTTGATCGGTGAACCG
GGAGTCGGAAAATCGGCCATAGTGGAAGGTCTGGCACTTCGTATTATACAGAAAAAGGTGTCCCGTATTCTGTTTGACAA
GCGTGTGGTTGCACTCGATATGACTGCGGTTGTTGCCGGTACCAAGTACCGCGGACAGTTTGAGGAACGCATTCGTTCCA
TCTTGAACGAATTGCAGAAGAATCCGAATGTGATTCTGTTCATTGACGAGATACATACCATTGTAGGTGCCGGATCGGCA
GCCGGATCGATGGATGCTGCCAACATGTTGAAGCCGGCATTGGCGCGTGGAGAGATTCAGTGTATCGGTGCCACTACCCT
TGACGAATATCGGAAGAATATCGAAAAAGACGGGGCGTTGGAGCGTCGTTTCCAGAAGGTAATGGTAGAGCCTACTACAG
TTGACGAAACGTTGCAGATTCTTCGTAATATTAAGGATAAATATGAAGATCATCACAACGTAAATTATACGGATGCGGCA
TTGGAAGCTTGTGTCAAGTTGACAGACCGTTATATAACCGACCGTAACTTCCCGGATAAAGCTATTGATGCACTCGATGA
AGCCGGTTCGCGTGTACATCTTACCAATGTGAGTGTACCCAAGGAAATAGAAGATCAGGAGAAGTTGATCGAAGAAGCTA
AAAATAACAAGAACGAGGCTGTCAAATCACAGAATTTCGAACTTGCTGCCAGTTTTCGCGATAAGGAAAAAGAACTTGCT
GTCCAGTTGGATGTGATGAAGAAAGACTGGGAGGAACGTTTGAAGGATAATCGTGAGACGGTGGATGAGGAAGAAATCGC
AAATGTCGTATCAATGATGTCCGGCATTCCGGTACAGCGTATGGCACAGGCGGAAGGCATCAAGTTGGCAGGCATGAAAG
AAGACCTGCAATCGAAGGTGATAGCTCAGGACGATGCTATCAAAAAGCTGGTCAAGGCCATTCTGCGCAGCCGTGTCGGA
CTGAAAGATCCGAATAAACCGATTGGTACATTTATGTTCCTAGGCCCTACCGGCGTTGGTAAAACTCATTTGGCCAAGGA
ATTGGCTAAATATATGTTTGGTTCTTCGGATGCATTGATCCGTATCGATATGAGTGAGTTTATGGAGAAATTCACAGTCT
CACGCTTGGTTGGAGCGCCTCCGGGATACGTAGGATACGAGGAAGGCGGACAATTGACAGAGAAAGTACGCCGTAAACCC
TATTCTATCGTATTGCTTGACGAAATAGAAAAGGCGCATCCCGATGTGTTCAATCTGCTTCTCCAGGTGATGGACGAAGG
TCGGCTGACTGACAGTTATGGCAGAATGGTTGACTTCAAGAATACTGTTATTATCATGACATCGAATATCGGAACCCGCC
AGTTGAAAGAGTTTGGGCGTGGAGTCGGTTTTGCCACTCAAAGCCGTCTTGACGATAAAGAATTCTCTCGCAGCGTGATT
CAGAAGGCTCTGAATAAATCGTTTGCACCCGAATTTATAAATCGTGTTGACGAAATCATCACCTTTGACCAGTTGTCATT
AGAAGCTATAACGAAGATTATCGATATTGAGTTGAAAGGACTGTATAACAGAATCGAATCTATCGGCTATAAACTGGTCA
TTGAAGACAAGGCTAAACAGTTTGTCGCTTCAAAAGGCTATGATGTCCAGTACGGTGCACGTCCGCTGAAGCGTGCCATC
CAGACCTATCTGGAAGACGGCTTATCGGAACTTATCATTTCGGCTGATCTGAATGAAGGAGATACGATCACTGTCTCTTT
GAATGAAGAAAAGGGTGAGTTGGAAATGAAGAATGAAGCCAAAACGGCTGAATAA

Protein sequence :
MNNQFSQKVSDIIVYSKEEANRLKSSYIGPEHLLLGMLRDGEGKAIEILSKLKTNLTDIKKQIEAILKEHADDMLLPDAD
VPLSNGAAKILKLCILEARVMKSQVADTEHVLLAILKDKDNLAATVLEANHVNYQQVFEQLSLQPDISAGMGFTEDDDDE
EEMNQSRSSHGSGERQQQAQTASRKPTNDTPVLDNFGTDMTKAAEEGRLDPVVGREQEIERLAQILSRRKKNNPILIGEP
GVGKSAIVEGLALRIIQKKVSRILFDKRVVALDMTAVVAGTKYRGQFEERIRSILNELQKNPNVILFIDEIHTIVGAGSA
AGSMDAANMLKPALARGEIQCIGATTLDEYRKNIEKDGALERRFQKVMVEPTTVDETLQILRNIKDKYEDHHNVNYTDAA
LEACVKLTDRYITDRNFPDKAIDALDEAGSRVHLTNVSVPKEIEDQEKLIEEAKNNKNEAVKSQNFELAASFRDKEKELA
VQLDVMKKDWEERLKDNRETVDEEEIANVVSMMSGIPVQRMAQAEGIKLAGMKEDLQSKVIAQDDAIKKLVKAILRSRVG
LKDPNKPIGTFMFLGPTGVGKTHLAKELAKYMFGSSDALIRIDMSEFMEKFTVSRLVGAPPGYVGYEEGGQLTEKVRRKP
YSIVLLDEIEKAHPDVFNLLLQVMDEGRLTDSYGRMVDFKNTVIIMTSNIGTRQLKEFGRGVGFATQSRLDDKEFSRSVI
QKALNKSFAPEFINRVDEIITFDQLSLEAITKIIDIELKGLYNRIESIGYKLVIEDKAKQFVASKGYDVQYGARPLKRAI
QTYLEDGLSELIISADLNEGDTITVSLNEEKGELEMKNEAKTAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BF2410 YP_099693.1 ATP-dependent Clp protease VFG0080 Protein 6e-148 49
BF2410 YP_099693.1 ATP-dependent Clp protease VFG0079 Protein 0.0 48