|
Name : BF1862 (BF1862) Accession : YP_099144.1 Strain : Bacteroides fragilis YCH46 Genome accession: NC_006347 Putative virulence/resistance : Unknown Product : SOS mutagenesis and repair protein UmuC-like protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 2190977 - 2192260 bp Length : 1284 bp Strand : - Note : similar to gpu:AE017176_168 [Porphyromonas gingivalis W83], percent identity 43 in 416 aa, BLASTP E(): 1e-98 DNA sequence : ATGTTTGGACTAATGGACTGCAATAACTTCTACGCAAGTTGCGAGAGAGTGTTCAATCCGGCTTTGAACGGTAAGCCGAT CGTTGTTTTAAGTAATAACGACGGATGTGTTATTGCCAGAAGTAACGAAGCGAAAACATTGGGGATTAAAATGGGAGTTC CGGCTTATCAGATCAAAGATGATATTCAGAAATATGGTATATCTGTCTTTTCATCGAACTATACGCTATACGGCGACATG TCCGGACGCGTGATGTCCATACTGGCAGAACAAGTGCCGGAAATGGAAGTATACAGTATAGACGAAGCATTTCTTAACCT GGAAGGGATTCGGGATATTCAGTCACTCGGAACAGACATCATAAACAAAGTAATCCGCGGAACCGGCATACCTGTTAGTT TGGGTATCGCCCCAACCAAAACACTCGCAAAGGTCGCCAATAAATTTGCAAAGAAATATCCTGCTTACAATCGTTTATGT ATCATCGATACAGAAGAAAAGCGCACCAAGGCCCTGCAACTTACTGAAATTGGAGACATCTGGGGGATCGGTCACCGGCA AGTTGCCAAGTTAGAAAAGCAGGGAGTCAAAACAGCCTATGATTTTACCGAGTTGCCCGAATCTTGGGTGCGTAAGAACA TGACTGTAGTCGGAGAAAGGACCTGGAAAGAACTTCAAGGCATTTCCTGTATTGATATGGAAACCACACCACCGGCCAAA AAGCAGATATGTACAAGTCGGTCATTCGGCAAGATGGTGGAGGACATCGATACAATGTCGGAAGCAATCGCCACTCACGC TTCTACATGCGCAAAGAAACTCCGACAACAGAAAGGCTATGCAATGTCACTAATGGTATTCATCCATACGAATAACTTCC GTAAAGATTCGCCACAATATTGGAGGAATACAGTTGTACATCTTCCGATACCGACCAATGACACATTAGAAATTGTACAT TATGCACTGGCCGGGCTAAAAACGATTTTCATGCAAGGCTATCAATATAAGAAAGCCGGAGTTATTATCACCGAAATAAC CGATAGCACCCAATTGGGACTGTTTGATTCAGTAGATCGCGAGAAACGTGAACGTCTTCAACAAACAATAGATAAGATAA ACGGTAAACACAGCCGACTCGTCAAATTAGCGATTCAAGGTACAGGGAGGAATTGGAAGCTTAAACAAAAACAGCTATCA GGGCATTATACCACTGACATCAATCAGATTATAAGCATTAATTGTACTTACCCAACTGCATGTCAACGAAAACAATATAG CTGA Protein sequence : MFGLMDCNNFYASCERVFNPALNGKPIVVLSNNDGCVIARSNEAKTLGIKMGVPAYQIKDDIQKYGISVFSSNYTLYGDM SGRVMSILAEQVPEMEVYSIDEAFLNLEGIRDIQSLGTDIINKVIRGTGIPVSLGIAPTKTLAKVANKFAKKYPAYNRLC IIDTEEKRTKALQLTEIGDIWGIGHRQVAKLEKQGVKTAYDFTELPESWVRKNMTVVGERTWKELQGISCIDMETTPPAK KQICTSRSFGKMVEDIDTMSEAIATHASTCAKKLRQQKGYAMSLMVFIHTNNFRKDSPQYWRNTVVHLPIPTNDTLEIVH YALAGLKTIFMQGYQYKKAGVIITEITDSTQLGLFDSVDREKRERLQQTIDKINGKHSRLVKLAIQGTGRNWKLKQKQLS GHYTTDINQIISINCTYPTACQRKQYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 7e-71 | 43 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 7e-71 | 43 |
