Gene Information

Name : BF0141 (BF0141)
Accession : YP_097424.2
Strain : Bacteroides fragilis YCH46
Genome accession: NC_006347
Putative virulence/resistance : Resistance
Product : tetracycline resistance protein
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0480
EC number : -
Position : 147508 - 149433 bp
Length : 1926 bp
Strand : -
Note : similar to gp:BFTETAQ3_1 [Bacteroides fragilis BF-2], percent identity 100 in 657 aa, BLASTP E(): 0.0

DNA sequence : 
ATGAATATTATAAATTTAGGAATTCTTGCTCACATTGATGCAGGAAAAACTTCCGTAACCGAGAATCTGCTGTTTGCCAG
TGGAGCAACGGAAAAGTGCGGCCGTGTGGATAATGGTGACACCATAACGGACTCTATGGATATAGAGAAACGTAGAGGAA
TTACTGTCCGGGCTTCTACGACATCTATTATCTGGAATGGAGTGAAATGCAATATCATTGACACTCCGGGACACATGGAT
TTTATTGCGGAAGTGGAGCGGACATTCAAAATGCTTGATGGAGCAGTCCTCATCTTATCCGCAAAGGAAGGCATACAAGC
GCAGACAAAGTTGCTGTTCAGTACTTTACAAAAGCTGCAAATCCCGACAATTATATTTATCAATAAGATTGACCGTGCCG
GTGTGAATTTGGAGCGTTTGTATATGGATATAAAAACAAATCTGTCGCAAGATGTCCTGTTTATGCAAACTGTTGTCGAT
GGATCGGTTTATCCGGTTTGCTCCCAAACATATATAAAGGAAGAATACAAAGAATTTGTATGCAACCATGACGACGATAT
ATTAGAACGATATTTGGCGGATAGCGAAATTTCACCGGCTGATTATTGGAATACGATAATCGCTCTTGTGGCAAAAGCCA
AAGTCTATCCGGTGCTACATGGATCAGCAATGTTCAATATCGGTATCAATGAGTTGTTGGACGCCATTTCTTCTTTTATA
CTTCCTCCGGCATCAGTCTCAAACAGACTTTCAGCTTATCTCTATAAGATAGAGCATGACCCCAAAGGGCATAAAAGAAG
TTTTCTTAAAATAATTGACGGAAGTCTGAGACTTCGAGACGTTGTAAGAATCAACGATTCGGAAAAATTCATCAAGATTA
AAAATCTAAAGACTATTTATCAGGGCAGAGAGATAAATGTTGATGAAGTGGGTGCCAATGATATCGCGATTGTAGAAGAT
ATAGAAGATTTTCGAATCGGAGATTATTTAGGTGCTAAACCTTGTTTGATTCAAGGATTATCTCATCAGCATCCCGCTCT
CAAATCCTCCGTCCGGCCAAATAAGCCCGAAGAGAGAAGCAAGGTGATATCCGCTCTGAATACATTGTGGATTGAAGACC
CGTCTTTGTCCTTTTCCATAAACTCATATAGTGATGAATTGGAAATCTCGTTATATGGTTTGACCCAAAAGGAAATCATA
CAGACATTGCTGGAAGAACGATTTTCCGTAAAGGTCCATTTTGATGAGATCAAGACTATCTACAAAGAACGACCTATAAA
AAAGGTCAATAAGATTATTCAGATCGAAGTACCACCCAACCCTTACTGGGCCACAATAGGGCTGACTCTTGAACCCTTAC
CGTTAGGGGCAGGGTTGCAAATCGAAAGTGACATCTCCTATGGTTATCTGAACCATTCTTTTCAAAATGCCGTTTTTGAA
GGGATTCGTATGTCTTGCCAATCTGGTTTACATGGATGGGAAGTGACAGATCTGAAAGTAACTTTTACTCAAGCCGAGTA
TTATAGCCCGGTAAGTACACCTGCTGATTTCAGACAGCTGACCCCTTATGTCTTCAGGCTGGCTTTGCAACAGTCAGGTG
TGGACATTCTCGAACCGATGCTCTGTTTTGAGTTGCAGATACCCCAAGTAGCGAGTTCCAAAGCTATTACAGATTTGCAA
AAACTGATGTCTGAGATTGAAGACATCAGTTGTAATAATGAGTGGTGTCATATTAAAGGGAAAGTTCCATTAAATACAAG
TAAAGACTATGCCTCAGAAGTAAGTTCGTACACTAAGGGCTTAGGCATTTTTATGGTTAAGCCATGTGGGTATCAAATAA
CAAAAGACGGTTATTCTGATAATATCCGCATGAACGAAAAAGATAAACTTTTATTCATGTTCCAAAAATCAATGTCATTA
AAATAA

Protein sequence : 
MNIINLGILAHIDAGKTSVTENLLFASGATEKCGRVDNGDTITDSMDIEKRRGITVRASTTSIIWNGVKCNIIDTPGHMD
FIAEVERTFKMLDGAVLILSAKEGIQAQTKLLFSTLQKLQIPTIIFINKIDRAGVNLERLYMDIKTNLSQDVLFMQTVVD
GSVYPVCSQTYIKEEYKEFVCNHDDDILERYLADSEISPADYWNTIIALVAKAKVYPVLHGSAMFNIGINELLDAISSFI
LPPASVSNRLSAYLYKIEHDPKGHKRSFLKIIDGSLRLRDVVRINDSEKFIKIKNLKTIYQGREINVDEVGANDIAIVED
IEDFRIGDYLGAKPCLIQGLSHQHPALKSSVRPNKPEERSKVISALNTLWIEDPSLSFSINSYSDELEISLYGLTQKEII
QTLLEERFSVKVHFDEIKTIYKERPIKKVNKIIQIEVPPNPYWATIGLTLEPLPLGAGLQIESDISYGYLNHSFQNAVFE
GIRMSCQSGLHGWEVTDLKVTFTQAEYYSPVSTPADFRQLTPYVFRLALQQSGVDILEPMLCFELQIPQVASSKAITDLQ
KLMSEIEDISCNNEWCHIKGKVPLNTSKDYASEVSSYTKGLGIFMVKPCGYQITKDGYSDNIRMNEKDKLLFMFQKSMSL
K

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tet(W) YP_005160006.1 tetracycline resistance protein Not tested Not named Protein 7e-105 41
SSU05_0922 YP_001198287.1 translation elongation factor (GTPases) Not tested 89K Protein 3e-109 41
SSU98_0928 YP_001200485.1 translation elongation factor (GTPases) Not tested 89K Protein 3e-109 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BF0141 YP_097424.2 tetracycline resistance protein Z21523.gene.p01 Protein 0.0 97
BF0141 YP_097424.2 tetracycline resistance protein AJ514254.gene.p01 Protein 0.0 61
BF0141 YP_097424.2 tetracycline resistance protein L42544.gene.p01 Protein 5e-144 48
BF0141 YP_097424.2 tetracycline resistance protein AJ295238.gene.p01 Protein 1e-112 43
BF0141 YP_097424.2 tetracycline resistance protein NC_002758.1120355.p0 Protein 1e-113 42
BF0141 YP_097424.2 tetracycline resistance protein NC_009782.5559075.p0 Protein 1e-113 42
BF0141 YP_097424.2 tetracycline resistance protein AJ222769.gene.p01 Protein 4e-105 41
BF0141 YP_097424.2 tetracycline resistance protein DQ294299.gene.p01 Protein 1e-103 41
BF0141 YP_097424.2 tetracycline resistance protein AY485126.gene.p01 Protein 5e-108 41
BF0141 YP_097424.2 tetracycline resistance protein M85225.gene.p01 Protein 2e-112 41
BF0141 YP_097424.2 tetracycline resistance protein AM180355.1.gene636.p Protein 3e-103 41
BF0141 YP_097424.2 tetracycline resistance protein X04388.gene.p01 Protein 1e-105 41
BF0141 YP_097424.2 tetracycline resistance protein FN594949.1.gene24.p0 Protein 2e-103 41
BF0141 YP_097424.2 tetracycline resistance protein L09756.gene.p01 Protein 3e-106 41
BF0141 YP_097424.2 tetracycline resistance protein L20800.gene.p01 Protein 8e-113 41