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Name : BF1007 (BF1007) Accession : YP_098291.1 Strain : Bacteroides fragilis YCH46 Genome accession: NC_006347 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1216330 - 1217604 bp Length : 1275 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTACCATTAAACAAATTACAGAAAACACCGACGCGGTAATCCGCGGTCTGGAGAAAAAACACTTCAAAGGAGCCAA AGAAACAATTGCCCAAGTAATCGAAGTGAATGACAAAAGACGTAATACACAAAATCAATTAGATAAAAACCTGGCAGAGG TAAATTCACTTTCGAAAACGATCGGTCAGTTGATGAAAGAAGGCAAAAAGGAAGAAGCTGAAGTTGCAAAAGCCCGTGTA GCCGAGATAAAGGAGAGCAATAAAACACTGCAGGCCGACATGGACCAGGCTGCCAACGACATGCTGAATCTGCTGTATAC CATTCCCAATATTCCCTACGACAGTGTGCCCGAAGGTGTTGGTGCCGAGGACAATGTAGTTGAGAAAATGGGAGGTATGG AAACTCAACTTCCCACAGATGCACTCCCCCATTGGGAACTGGCTAAGAAATACGACTTGATTGACTTTGATTTGGGTGTA AAAATAACCGGTGCAGGTTTTCCTGTTTACAAAGGCAAAGGAGCTCAACTGCAACGCGCACTGATTAACTTTTTCCTGGA TGAAGCACGTAAATCCGGATATACCGAAATCATGCCTCCAACAGTTGTAAACGCTGCTTCCGGCTATGGAACCGGACAAC TTCCAGATAAAGAAGGACAAATGTACCATTGCGAAGTAGACGATCTCTATCTGATTCCGACGGCTGAAGTTCCGGTAACC AATATCTACCGTGACGTCATTTTGGATGAAAAGCAACTTCCTATTAAAAACTGCGCTTATACACAATGCTTCCGTCGGGA AGCCGGCTCTTACGGTAAAGATGTACGCGGGCTCAATCGCCTTCACGAATTCTCTAAAGTAGAATTGGTGCGTATCGACA AACCGGAGCACTCCCGTCAGTCACATCAGGAAATGCTGGATCATGTAGAAGGCCTGCTCCAGAAGCTGGAACTCCCTTAC CGTATTCTCCGTCTCTGTGGTGGTGATATGAGTTTTACCGCTGCGCTTTGCTTTGATTTCGAAGTATATTCCGAAGCACA GAAGCGCTGGTTGGAAGTCAGCTCTGTATCTAACTTCGATACTTACCAAGCCAACCGATTAAAATGCCGCTATCGTAGCG GAGAAAAGAAAACCGAACTTTGCCACACACTGAACGGATCGGCACTGGCATTGCCCCGCATCGTAGCAGCCTTGCTGGAA AACCATCAGACTCCGGAGGGTATCCGGATTCCGAAAGCATTGGTTCCCTACTGCGGATTTGACATGATCGACTGA Protein sequence : MLTIKQITENTDAVIRGLEKKHFKGAKETIAQVIEVNDKRRNTQNQLDKNLAEVNSLSKTIGQLMKEGKKEEAEVAKARV AEIKESNKTLQADMDQAANDMLNLLYTIPNIPYDSVPEGVGAEDNVVEKMGGMETQLPTDALPHWELAKKYDLIDFDLGV KITGAGFPVYKGKGAQLQRALINFFLDEARKSGYTEIMPPTVVNAASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVT NIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSRQSHQEMLDHVEGLLQKLELPY RILRLCGGDMSFTAALCFDFEVYSEAQKRWLEVSSVSNFDTYQANRLKCRYRSGEKKTELCHTLNGSALALPRIVAALLE NHQTPEGIRIPKALVPYCGFDMID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-66 | 43 |
