Gene Information

Name : lysS (BLi00097)
Accession : YP_006711552.1
Strain : Bacillus licheniformis DSM 13
Genome accession: NC_006322
Putative virulence/resistance : Virulence
Product : lysyl-tRNA ligase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 93349 - 94848 bp
Length : 1500 bp
Strand : +
Note : -

DNA sequence :
ATGAGCCATGAAGAGCATAACCATGAAGAATTAAACGACCAGCTGCAAGTCAGACGCGATAAAATGAATCAGTTGAGAGA
AAGCGGAAAAGATCCTTTCGGACAGCGTTTTGATCGCACCCATCAATCAACTGATCTCATTGAGTCGTATAATGAATTCT
CAAAAGAAGAATTAGAGGAAAAAGCAATTGAAGTAACGATTGCCGGCCGGATGATGACAAAGCGCGGAAAAGGGAAAGCG
GGATTCGCGCATATTCAGGATTTAAAGGGCCAGATTCAGATCTATGTCAGAAAAGACAGTGTCGGTGAAGAGCAGTACGA
ATGGTTTAAAAGCTCTGACCTCGGGGACATCGTCGGCGTTACAGGCGTCATGTTTAAAACGAATGTAGGCGAATTGTCTG
TAAAAGCAACATCTTTTGATTTATTGACAAAAGCTCTTCGTCCGCTTCCGGACAAATATCATGGATTAAAGGACATCGAG
CAGCGCTACCGTCAGCGTTATTTGGATTTGATCGTAAATCCGGAAAGCAAAAATACGTTTATTACACGAAGCAAAATCAT
TCAATCCATGAGAAGATACTTAGATGACCACGGATACTTAGAAGTTGAAACGCCTACGATGCACGCGATTCCGGGTGGCG
CATCTGCCCGTCCGTTCATTACACATCATAATGCGCTGGATATGCCGCTTTACATGAGGATCGCTATCGAGCTCCATTTG
AAAAGGCTGATCGTCGGCGGGTTGGAAAAAGTCTATGAAATCGGACGTGTATTCCGAAATGAAGGGGTCTCCACACGGCA
CAATCCTGAATTTACGATGATCGAACTTTACGAAGCTTATGCTGACTATAAGGATATTATGAGATTGACGGAAAATCTCA
TTGCTCATATTGCACAAGAAGTGCTCGGCACTACGACCGTTCAATATGGAGATTATGAAGTCGACCTCAAGCCTGAATGG
AAGAGACTCCATATGGTCGATGCTGTTAAAGAAGCCACCGGTGTAGACTTCTGGAAAGAAGTATCGGTAGAAGAAGCAAG
AGCATATGCCAAAGAACACGGAATTGAAATTTCTGAAGGCATGTCAGTTGGACATATCATTAATGAATTCTTCGAGCAAA
AAGTTGAAGAAACGTTGATTCAGCCTACTTTTATATACGGACACCCTGTGGAGATTTCTCCTCTGGCTAAGAAAAATCCT
GAAGACCCTCGATTTACGGACCGTTTTGAGCTGTTTATCGTGGGCCGTGAGCACGCGAATGCATTTACTGAATTAAATGA
TCCTATCGACCAAAAAGAACGCTTTGAAGCGCAATTAAAAGAACGTGAAGAAGGAAACGATGAAGCGCATATGATGGATG
AAGACTTTGTCGAAGCGCTGGAGTACGGAATGCCTCCTACCGGCGGCCTTGGAATCGGCATCGACAGACTGATTATGCTT
TTGACGAATTCTCCTTCAATCAGGGACGTTTTACTATTCCCGCAAATGAGACATCGTTAG

Protein sequence :
MSHEEHNHEELNDQLQVRRDKMNQLRESGKDPFGQRFDRTHQSTDLIESYNEFSKEELEEKAIEVTIAGRMMTKRGKGKA
GFAHIQDLKGQIQIYVRKDSVGEEQYEWFKSSDLGDIVGVTGVMFKTNVGELSVKATSFDLLTKALRPLPDKYHGLKDIE
QRYRQRYLDLIVNPESKNTFITRSKIIQSMRRYLDDHGYLEVETPTMHAIPGGASARPFITHHNALDMPLYMRIAIELHL
KRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMRLTENLIAHIAQEVLGTTTVQYGDYEVDLKPEW
KRLHMVDAVKEATGVDFWKEVSVEEARAYAKEHGIEISEGMSVGHIINEFFEQKVEETLIQPTFIYGHPVEISPLAKKNP
EDPRFTDRFELFIVGREHANAFTELNDPIDQKERFEAQLKEREEGNDEAHMMDEDFVEALEYGMPPTGGLGIGIDRLIML
LTNSPSIRDVLLFPQMRHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 5e-126 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_006711552.1 lysyl-tRNA ligase VFG1668 Protein 3e-126 53