Gene Information

Name : epsC (BLi03692)
Accession : YP_006714975.1
Strain : Bacillus licheniformis DSM 13
Genome accession: NC_006322
Putative virulence/resistance : Virulence
Product : polysaccharide biosynthesis protein EpsC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3519321 - 3521138 bp
Length : 1818 bp
Strand : -
Note : -

DNA sequence :
TTGACATATCGGAGAAGGCTTTCCATTATTACCGCACTCGATTCGTACTTGGTTTTGCTGTCCATCTTTATCGGATATCA
GCTGATTTTGCCATCATATGATTTATACCCTTCGGAAATGCTGCTGATGACTTCACTGATACTGCTTGGCGCTCAGCATT
TATTCGCCCATTGCTTCCACCTTTATAAAAAAGTATGGGAGTATGCAAGCATCGGTGAATTGTATGTGCTGCTTAAATCG
ATTACATTGTCCCATCTTGTGACGGCGGCCCTCGAGCTGTTTTTCTTTCAAAACGTTCCGGTTCGTCTTTTATGTTTAAG
CTGGCTGTTCCAGCTCATTTTGATCGGCGGATCGCGGATGATGTGGCGCATCATCAGGGAACAGGTGAACAAAGAAAGCA
AAGGATCTCTAAGGGCGCTTATCATCGGAGCGGGCTCTGCCGGCAGTTTGATTGCAAAACAGCTTGTGCAGAAGCCGGAA
TTGAACATTAAGCCCGTCGCCTTTATCGACGATGACAAAACGAAATACCGGCTTGAAATCATGGGTCTGCCCGTCTTAGG
CGGGAAAGAGCAGATTATGCAGGCGGTCCGGCAATGGAATATCGACCGGATCATCATCGCCATTCCATCTTTGAGCGTCA
CTCAGATGCAGGAAATGTACAAGGCGTGTGCGCAAACAGGTGTCAAAACGCAAATCATGCCGAAAATAGACGAAATTTTG
CTTGGCAGACATCCTGTCGGCCAGCTTCGCGATGTCAAAGCAGAAGATTTGCTTGGAAGGGAGCCTGTCCAGCTCGATAC
GAGCGAAATCTCCAATACGGTCAAGGACCGCGTCGTACTTGTGACTGGGGCCGGAGGTTCAATCGGCTCGGAAATCTGCC
GGCAAATCAGCAAATTTAAACCGAAATCGATCATTTTAGTCGGGCACGGAGAAAACAGCATCCATTCGATCCTGCTTGAA
CTGAAGGAGAAATTCGGAAAGCATGTCGCCTATTATCCCGAAATCGCGGACATACAGGACAGAGAAAAAATGTTTTTGCT
GATGGAACGCTACAAACCGAATGTCATTTATCATGCAGCTGCCCACAAGCATGTACCGCTGATGGAAAAATGCCCGAAAG
AAGCTGTCAAAAACAATATCCTCGGCACGAAAAACGTCGCTGAGGCCGCCGACGAAACCGAAGTGGAGACATTTGTCCTG
ATATCGTCAGACAAAGCGGTCAACCCTGCCAATATCATGGGGGCAACGAAGCGGTTCGCGGAAATGCTGATCATGAATCT
CGGCAAAACGAGCAAAACCAAATTTGTCGCCGTCCGCTTCGGAAATGTTCTCGGCAGCAGGGGAAGCGTCATTCCGATTT
TCAAAAAACAAATCGCTAAAGGCGGCCCGGTCACTGTCACACACCAGGACATGACGAGGTACTTCATGACGATTCCGGAA
GCTTCAAGGCTCGTTATTCAAGCGGGGGCGCTTGCCAAAGGAAGACAGATATTCGTGCTCGATATGGGCGAACCGGTCAA
AATCGTCGACCTCGCCAAAAATCTTATCCAGCTTTCCGGCTATACGACAGAACAGATCAAAATCGAATTTACAGGCATCC
GGCCGGGAGAAAAAATGTACGAAGAGCTGCTGAATCAAAATGAAGTGCTGGCAGAGCAGGTTTTTCCGAAGATTCATATC
GGCAAGGCGGTCGACGTCGAATGGACGGTGCTGAAGTCATTTATGGATGAATTTATGTATTTGTCAGACCGCGAGCTGAG
AGAACGCTTGTTCAAAGCGATCGGCCAGCACGAGAAAAAGCTGGTGACAGCGCACTAG

Protein sequence :
MTYRRRLSIITALDSYLVLLSIFIGYQLILPSYDLYPSEMLLMTSLILLGAQHLFAHCFHLYKKVWEYASIGELYVLLKS
ITLSHLVTAALELFFFQNVPVRLLCLSWLFQLILIGGSRMMWRIIREQVNKESKGSLRALIIGAGSAGSLIAKQLVQKPE
LNIKPVAFIDDDKTKYRLEIMGLPVLGGKEQIMQAVRQWNIDRIIIAIPSLSVTQMQEMYKACAQTGVKTQIMPKIDEIL
LGRHPVGQLRDVKAEDLLGREPVQLDTSEISNTVKDRVVLVTGAGGSIGSEICRQISKFKPKSIILVGHGENSIHSILLE
LKEKFGKHVAYYPEIADIQDREKMFLLMERYKPNVIYHAAAHKHVPLMEKCPKEAVKNNILGTKNVAEAADETEVETFVL
ISSDKAVNPANIMGATKRFAEMLIMNLGKTSKTKFVAVRFGNVLGSRGSVIPIFKKQIAKGGPVTVTHQDMTRYFMTIPE
ASRLVIQAGALAKGRQIFVLDMGEPVKIVDLAKNLIQLSGYTTEQIKIEFTGIRPGEKMYEELLNQNEVLAEQVFPKIHI
GKAVDVEWTVLKSFMDEFMYLSDRELRERLFKAIGQHEKKLVTAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 1e-130 54
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-129 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
epsC YP_006714975.1 polysaccharide biosynthesis protein EpsC VFG1300 Protein 1e-130 53
epsC YP_006714975.1 polysaccharide biosynthesis protein EpsC VFG0029 Protein 6e-73 41