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Name : clpC (BLi00104) Accession : YP_006711556.1 Strain : Bacillus licheniformis DSM 13 Genome accession: NC_006322 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ClpC Function : - COG functional category : - COG ID : - EC number : - Position : 102347 - 104779 bp Length : 2433 bp Strand : + Note : ''ATPase subunit of the ClpC-ClpP protease, involved in competence development, heat shock regulation, motility, sporulation, protein quality control, biofilm formation'' DNA sequence : ATGATGTTTGGAAGATTCACAGAAAGAGCACAAAAAGTATTGGCGCTTGCTCAAGAAGAAGCTCTGCGTCTGGGCCATAA TAACATTGGAACAGAACATATTCTCCTCGGCCTTGTCCGCGAGGGAGAAGGAATTGCTGCGAAAGCGCTGCAGGCGTTAG GACTCAGCCCTGACAAGATTCAAAAAGAAGTTGAAAGCCTCATCGGCCGCGGACAAGAAATGTCACAATCGATCCATTAC ACACCGAGAGCCAAGAAAGTGACCGAATTGGCGATGGATGAAGCGAGAAAGCTTGGCCACTCCTACGTTGGAACTGAACA CATCCTCCTTGGCTTAATCCGCGAAGGGGAAGGTGTTGCGGCAAGGGTGCTGAATAATTTAGGCGTCAGCTTAAACAAAG CGAGACAGCAAGTATTGCAGCTGTTGGGCAGCAATGAGAGCGGAGGCGCTGCTTCAGGCGCCAACAGTAGCGCCAACACA CCAACTTTAGACAGTCTTGCCCGGGATCTCACGGCGATTGCAAAAGAAGACAGCCTTGATCCCGTGATCGGCAGAAGCAA AGAAATTCAACGCGTGATTGAAGTGTTGAGCCGCAGAACGAAAAATAACCCTGTGTTAATCGGGGAGCCTGGTGTCGGTA AGACTGCGATTGCCGAAGGCCTGGCCCAGCAGATCATCAATAACGAAGTACCGGAGATTTTACGCGACAAGCGCGTCATG ACACTTGATATGGGAACGGTTGTCGCCGGCACGAAATATCGCGGTGAATTTGAAGACCGCCTGAAAAAAGTGATGGACGA AATTCGTCAAGCGGGAAATATCATCCTCTTCATCGATGAGCTGCATACTCTCATCGGAGCCGGAGGAGCGGAAGGGGCCA TCGATGCCTCCAATATCCTTAAACCGTCGCTGGCGCGCGGAGAGCTGCAATGCATCGGGGCGACAACCCTTGATGAATAC CGCAAATACATTGAAAAAGATGCTGCACTAGAACGGCGTTTTCAGCCGATTCAGGTTGACCAGCCGTCTCCTGAAGAAAG CATTCAAATATTGAAAGGGCTCAGAGACCGCTATGAAGCCCATCACCGCGTATCGATTACGGATGAAGCGATCGAAGCGG CAGTAAAGCTGTCAGACCGCTACATTTCGGACCGTTTTCTGCCTGACAAGGCGATCGACTTAATCGATGAAGCCGGCTCA AAGGTTAGACTGCGTTCATTCACAACGCCTCCTAACTTAAAAGAGCTTGAACAAAAGCTTGATGAGGTAAGGAAAGAAAA AGATGCCGCTGTTCAAAGCCAGGAATTCGAAAAAGCAGCGTCTTTACGTGATACGGAGCAGCGCTTGCGTGAACAGGTCG AAGAAACCAAGAAAACCTGGAAAGAAAAGCAAGGTCAAGAAAATTCCGAAGTGACCGTCGACGATATTGCAATGGTTGTA TCAAGCTGGACCGGAGTGCCGGTTTCCAAAATTGCGCAGACCGAAACAGACAAATTGCTGAACATGGAGAGCATTCTTCA TTCCCGCGTTATCGGCCAGGATGAGGCTGTCGTTGCAGTTGCAAAAGCAGTCAGACGCGCGCGTGCCGGCTTAAAAGATC CAAAACGTCCTATCGGTTCGTTTATTTTCCTTGGCCCAACAGGCGTAGGGAAAACGGAGCTTGCCCGTGCACTTGCCGAG TCCATTTTCGGCGATGAAGAAGCAATGATTCGCATCGATATGTCCGAGTACATGGAAAAACATTCAACATCAAGACTCGT CGGTTCACCTCCTGGATATGTCGGCTATGATGAAGGCGGACAGCTCACTGAAAAAGTGAGAAGAAAACCGTATTCCGTCG TCTTGCTTGATGAAATCGAGAAAGCTCACCCAGATGTCTTCAATATTTTGCTGCAGGTGCTTGAAGACGGCCGCCTGACT GATTCAAAAGGGCGCACGGTTGACTTTAGGAATACGATTTTGATCATGACATCAAACGTCGGTGCGAGCGAACTGAGAAG AAATAAATACGTCGGGTTTAATGTCCAGGATGAAACCCAGAATTATAAAGATATGAAAGACAAAGTCATGGGTGAACTAA AACGCGCCTTTAGACCTGAATTTATCAACCGGATTGATGAGATCATCGTCTTCCACTCTTTGGAGAAAAAACATTTGAAA GATATTGTATCCCTCATGTCAGACCAATTGACCAAGCGTCTGAAAGAACAGGATCTTTCAATTGAGCTGACTGAAGCGGC TAAAGAAAAAATCGCCGATGAAGGCGTGGATCTCGAATACGGAGCGCGTCCTCTCAGAAGAGCAATCCAAAAACACGTGG AAGACCGGCTGTCAGAAGAGCTCCTAAAAGGCCATATTCAAAAAGGCCAGCATATTGTTTTGGATGTAGAAGACGGAGAA TTTGTCGTAAAAACCGAAGCTAAAACGAACTAA Protein sequence : MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMSQSIHY TPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGAASGANSSANT PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY RKYIEKDAALERRFQPIQVDQPSPEESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGQENSEVTVDDIAMVV SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT DSKGRTVDFRNTILIMTSNVGASELRRNKYVGFNVQDETQNYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLK DIVSLMSDQLTKRLKEQDLSIELTEAAKEKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGHIQKGQHIVLDVEDGE FVVKTEAKTN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 58 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-97 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_006711556.1 | ATP-dependent Clp protease ClpC | VFG0079 | Protein | 0.0 | 79 |
| clpC | YP_006711556.1 | ATP-dependent Clp protease ClpC | VFG0080 | Protein | 1e-150 | 54 |
