Gene Information

Name : potB (MS0811)
Accession : YP_088003.1
Strain : Mannheimia succiniciproducens MBEL55E
Genome accession: NC_006300
Putative virulence/resistance : Unknown
Product : spermidine/putrescine ABC transporter membrane protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1176
EC number : -
Position : 785529 - 786389 bp
Length : 861 bp
Strand : -
Note : can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component

DNA sequence :
ATGAAAATGACAACGCGTAAATTCCAAAATTCTACCGTTGCTGTTATCTTCGCTTGGCTGATTTTCTTTATGTTCGTACC
TAATTTCTTGGTACTTATCGTCAGTTTCCTAAGTAAAGACAGTAGCAATTTTTATGCTTTACCGTTTACCTTTGAGAACT
ATGCCCGTCTGTTTGAGCCTTTATACGGCACGGTAGTATGGAACTCTTTGTATATGTCCGGTATCGCAACCGTGATTTGT
TTACTTATCGGCTACCCTTTCGCCTTTTTTATGGCGAAACTCAATCCGAAATACCGACCAATTTTGTTATTCCTATTAGT
ATTACCGTTTTGGACGAATTCACTTATCCGTATTTACGGTATGAAAGTATTCCTCGGTGTAAAAGGAATTCTGAATGAAT
TTCTCTTATTCACCGGTATTATCGACGAACCGATCCGTATTCTTAATACGGAAGTTGCTGTCATTATCGGCTTAGTTTAT
TTGCTGTTGCCTTTTATGATTTTACCGCTCTACTCCGCTATTGAAAAATTAGACTTGCGTTTACTTGAAGCGGCAAAAGA
TTTAGGTGCTAACGGTATTCAGCGTTTTATCAAAATCATTATTCCGTTAACCATGCCGGGTATTGTTTCCGGTTGTTTGT
TGGTGTTACTGCCGGCAATGGGAATGTTCTACGTTGCGGATCTATTAGGCGGTGCAAAAGTATTATTAGTGGGTAACGTA
ATTAAGAGTGAATTCTTAATTTCCCGTAACTGGCCGTTCGGTTCGGCAATCAGTATCGGATTAACCATATTAATGGCGTT
ATTAATATTTGTTTATTATAAAGCAAATAAATTATTGAATAAGAAAGTGGAGTTGGAATAA

Protein sequence :
MKMTTRKFQNSTVAVIFAWLIFFMFVPNFLVLIVSFLSKDSSNFYALPFTFENYARLFEPLYGTVVWNSLYMSGIATVIC
LLIGYPFAFFMAKLNPKYRPILLFLLVLPFWTNSLIRIYGMKVFLGVKGILNEFLLFTGIIDEPIRILNTEVAVIIGLVY
LLLPFMILPLYSAIEKLDLRLLEAAKDLGANGIQRFIKIIIPLTMPGIVSGCLLVLLPAMGMFYVADLLGGAKVLLVGNV
IKSEFLISRNWPFGSAISIGLTILMALLIFVYYKANKLLNKKVELE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
potB BAA36746.1 - Not tested LIM Protein 2e-84 63