Gene Information

Name : wcaA (MS0664)
Accession : YP_087856.1
Strain : Mannheimia succiniciproducens MBEL55E
Genome accession: NC_006300
Putative virulence/resistance : Virulence
Product : WcaA protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 616308 - 617240 bp
Length : 933 bp
Strand : +
Note : Glycosyltransferases involved in cell wall biogenesis

DNA sequence :
ATGAAAGTTTCTTTAGCCGTGCCAGTTTTTAATGAAGAAGATACCATCCCACTTTTTTACCAAAAAGTAAGAAACTATGA
AGAATTACAAGCTTATGATGTAGAGATTGTATTTATTAATGATGGCTCATCTGATAAAACAGAAGAAATTATCACCGCAC
TTTCGGCACAAGATCCTCTTGTACAAGCGGTTCAATTTTCACGAAATTTTGGAAAAGAGCCAGCGTTATTTGCAGGTTTA
GAGTATTCAACAGGAGATGTAGTGATTCCGATTGATGTGGATTTACAGGATCCCATTGAAGTTATTCCAGAACTGATTAA
AGAACACCAAAAAGGTTTTGATGTCGTGTTGGCAAAACGTGTTGACCGACAAACTGATTCTTGGTTTAAACGTAAAACAG
CGCTTTGGTTTTATAAATTACACAACCAAATTTCAAAACCTAAAATTGAAGAAAACGTTGGTGATTTCCGTTTAATGAGT
CGTCGAGTTGTAGAGGCAATCAAACAATTGCCAGAACGTCAGCTATTTATGAAGGGGATTTTAAGCTGGGTTGGTTTTGA
TACTGCTGTTGTAGAGTATAACCGTGCTGAAAGAGTTGCCGGCACAACTAAATTTAATGGGTGGAAACTCTGGAATTTTG
CTTTAGAAGGCATTACTTCATTTAGTACATTTCCGCTTCGTTTATGGACATATATTGGATTATTTATTTCTGCTTGTAGC
TTTTTATATGGCAGCATCTTGATTTTAGGCAAACTAATTTGGGGTAATACCGTGCCAGGCTATCCATCTTTAATGGTGGC
AATTCTCTTCTTAGGTGGCGTGCAATTAATCGGTGTTGGTGTGCTAGGTGAATATATTGGACGGATTTATTCCGAAAGTA
AGCAAAGACCTAGATATATTGTGAAAACTCAAAAAGGTAATAATAATGAATAA

Protein sequence :
MKVSLAVPVFNEEDTIPLFYQKVRNYEELQAYDVEIVFINDGSSDKTEEIITALSAQDPLVQAVQFSRNFGKEPALFAGL
EYSTGDVVIPIDVDLQDPIEVIPELIKEHQKGFDVVLAKRVDRQTDSWFKRKTALWFYKLHNQISKPKIEENVGDFRLMS
RRVVEAIKQLPERQLFMKGILSWVGFDTAVVEYNRAERVAGTTKFNGWKLWNFALEGITSFSTFPLRLWTYIGLFISACS
FLYGSILILGKLIWGNTVPGYPSLMVAILFLGGVQLIGVGVLGEYIGRIYSESKQRPRYIVKTQKGNNNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 6e-101 73
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 1e-98 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
wcaA YP_087856.1 WcaA protein VFG0670 Protein 8e-102 74