Gene Information

Name : soxR (MS0468)
Accession : YP_087660.1
Strain : Mannheimia succiniciproducens MBEL55E
Genome accession: NC_006300
Putative virulence/resistance : Resistance
Product : SoxR protein
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 435209 - 435619 bp
Length : 411 bp
Strand : +
Note : Predicted transcriptional regulators

DNA sequence : 
ATGAGAATTGGTCAGCTTGCGAAAGCGGTGGGATGTACCATTGAGACGATTCGTTATTATGAAAATCAAGGTTTGTTGGC
TAAACCGCAACGTTCAGCCAATAATTTTAGATATTATACGAATGATCATCTGCAGCAGTTGTCTTTTATTTGCTATTGTC
GAAGTTTGGATATGTCGCTGCATGAAATTAAAATGTTACTGAATTTAGACCGCAGTTCCGGGCAGCGGGCGGAGGAGATT
AATCTGCTGCTGGACAAACATATCCGTGATGTGGCAAAACGCCTGCATGAACTGGCTCATTTGCGTATGGAACTGATTAA
ATTAAAGCAAAAATGCAGCGAAATGACGGGTGAAAATTTAATGCAAAATATTTTTAGCGGCGGCAATATTCGCTTTCGCA
AAATAAAGTGA

Protein sequence : 
MRIGQLAKAVGCTIETIRYYENQGLLAKPQRSANNFRYYTNDHLQQLSFICYCRSLDMSLHEIKMLLNLDRSSGQRAEEI
NLLLDKHIRDVAKRLHELAHLRMELIKLKQKCSEMTGENLMQNIFSGGNIRFRKIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 6e-22 47
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 2e-20 44
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-20 44
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 1e-20 44
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-20 44
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 1e-20 44
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 1e-20 44
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 1e-20 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
soxR YP_087660.1 SoxR protein BAC0058 Protein 7e-27 42