Gene Information

Name : MS0387 (MS0387)
Accession : YP_087579.1
Strain : Mannheimia succiniciproducens MBEL55E
Genome accession: NC_006300
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2194
EC number : -
Position : 355716 - 357341 bp
Length : 1626 bp
Strand : +
Note : Predicted membrane-associated, metal-dependent hydrolase

DNA sequence :
ATGATCCGTTTCCCTCGTTTTAACTTAAGAAGTTCAACGTTAATTGCCATTGTGGCGCTTTATTTCACATTAGTATTAAA
TTTTGCATTTTACGGCAAAGTATTAACCCAACATCCTTTTACCGGCAAGCCGGAAGATTATTTTTTATTAACGGTTCCGT
TTTTTGTATTTTTTACGCTGAACGCCGTTTTTCAGATCTTAGCCGTGCCGCTATTGCATAAAATTATTATGCCGTTACTG
TTGATTATCAGTGCTGCGATTGCGTATAGCCAAGTGTTTCTGGACGTTTATTTTACAACGGATATGCTGGAAAACGTATT
GCAGACCACATCTGCTGAAAGTACGCGGATGATAACCTGGCAATATGTGTTATGGATTATCGGATTCGGTATTATTCCAG
CTTTTTTGTATCTTTCCGTAAAAATAAATTACCATACCTGGTTTAAAGAATTAGGAATTCGTCTGGGTGCAATTTTAGTT
TCCGCAGTTGTGATTTTCAGTATTTCGAAATTTTTCTATCAGGATTATGCGGCGTTTGTACGCAACAACAAACCGACGGT
CAATTTAATTTTGCCTTCGAATTTTATTACCGCGGGTGTGAATGAAATCAAACGTATCCATGATGCTAATCGCCCTTATG
AAAAAATCGGATTGGACGCTCAACAGGAGAAACCGGATCCTTATCGTCATTTTACGGTTATTGTCGTCGGTGAAACTACC
CGTGCACAAAACTGGGGACTGAACGGTTATCAACGGCAAACTACGCCGAAACTGGCGGCGCGTGGTGATGACGTTATTAA
TTTCAATCACGTGACCAGCTGCGGTACGGCGACTGCGGTGTCTGTGCCTTGTATGTTCTCGTATTTGACGAAAGATCAGT
ATAACGGTTCGAAAGCGGAAAAAATGGATAATCTGTTGGACGTGTTGCAGCGCGCGGGGGTGAATATTTTTTGGCTGGAT
AATAACAGCGACTGCAAAGGTGTTTGTTTGCGCGTGCCGAATGAAACCGTCAATATGACGCTGAAAGATTATTGTACGGA
AGGAGAATGTCTGGACGAAGTTTTATTGCGCGATTTTGATAAAATCCTGAATGAAACCACTAAAGATACCGTGCTGATTT
TGCACACTATCGGCAATCACGGCCCGACTTATTATGAGCGTTATACGCCGGAGTATAAAAAGTTTGTACCGACTTGCGAT
ACTAATCAGATTCAGACGTGCAGCAATGAGCAATTAGTTAATACTTACGATAACAGTATTTTGTATATTGATAATTTTAT
TGATTCCGTGATCTCAAAATTGGAAAACAGAGATGATTTGGAAAGTGCGGTTTATTATGTATCGGATCACGGCGAATCTC
TGGGGGAAAACGGTATGTATCTGCACGGCGCCCCTTATGCTATCGCCCCGGAACAGCAAACCCGCGTGCCAATGGTCTTT
TGGTTTTCAAAAACTTGGAAAAAGAATGAGGGGGTAGATTTAAATTGCGTCAGAGAGAAAGCGAAAACACGGGAATTTTC
TCATGATAATCTTTTCAGCACCGTAATCGGTATGATGGATATGAATTTAAAAACCTCTGTTTATCAACCCGAATTTGATA
TTCTGGCAAGTTGTAAGCGACATTAA

Protein sequence :
MIRFPRFNLRSSTLIAIVALYFTLVLNFAFYGKVLTQHPFTGKPEDYFLLTVPFFVFFTLNAVFQILAVPLLHKIIMPLL
LIISAAIAYSQVFLDVYFTTDMLENVLQTTSAESTRMITWQYVLWIIGFGIIPAFLYLSVKINYHTWFKELGIRLGAILV
SAVVIFSISKFFYQDYAAFVRNNKPTVNLILPSNFITAGVNEIKRIHDANRPYEKIGLDAQQEKPDPYRHFTVIVVGETT
RAQNWGLNGYQRQTTPKLAARGDDVINFNHVTSCGTATAVSVPCMFSYLTKDQYNGSKAEKMDNLLDVLQRAGVNIFWLD
NNSDCKGVCLRVPNETVNMTLKDYCTEGECLDEVLLRDFDKILNETTKDTVLILHTIGNHGPTYYERYTPEYKKFVPTCD
TNQIQTCSNEQLVNTYDNSILYIDNFIDSVISKLENRDDLESAVYYVSDHGESLGENGMYLHGAPYAIAPEQQTRVPMVF
WFSKTWKKNEGVDLNCVREKAKTREFSHDNLFSTVIGMMDMNLKTSVYQPEFDILASCKRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1140 NP_286675.1 hypothetical protein Not tested TAI Protein 4e-89 42
Z1579 NP_287083.1 hypothetical protein Not tested TAI Protein 4e-89 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MS0387 YP_087579.1 hypothetical protein BAC0485 Protein 3e-105 44