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Name : gspE (MS0363) Accession : YP_087555.1 Strain : Mannheimia succiniciproducens MBEL55E Genome accession: NC_006300 Putative virulence/resistance : Virulence Product : GspE protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 335204 - 336634 bp Length : 1431 bp Strand : - Note : Predicted ATPases involved in pili biogenesis, PilB similarity DNA sequence : GTGATAATAAAGAATAGCGATGTCCGACTAATGCAATCAATTAAAATCATTGCCGGCAATGGCGAACAATACATGATTGA TCACGAATTGTGGCAACGCAATCAACAGCAGCAACATGTATTGTTACGCTATCTTGCCGTACCCATCAAAGAGGAAGAGC AAAAACTATGGCTTGCCATTGATAATGTAGAAAATATCGCCGCTTGCGAAACCTTTTCCTTTTTAACCGGCAAAATTGTT GAACCCGTATTAGTCAGTAACGAAACCTTAAAATCATTATTGCAACCGGATGAACCGCAATCATTAAGTATTGAAGAAAC ATCATTGATTTATACGGAAAGCCTCTCTCAAAATAAGGAAAATAAAAATACCGACGAACCTATTATCCGTTTATTAAATA ATATTTTTGAGAGCGCCCTAAGTAAAAATGCCTCCGATATTCATTTCGAGCCGCAAAAAAACCAGCTTCGGATTCGTTTT AGGATTGACGGTGTGTTGCAACAACAAACACCCGTTAATCTTTCTTTAGCAGGGCGCATTATTTCAAGATTAAAACTGTT GGCAAAATTAGATATCAGCGAAACCCGCTTACCGCAAGACGGACGTTTTGATTTCAAAACCACCTTCGCCGAAACCCTGG ATTTTCGTATATCGACCCTTGCCACCAGTAACGGTGAAAAAATCGTGCTGCGTTTACAACAAAATAAACCGGTGGATTTC AGCTTTGAACAACTTGGTATGGAGCCTGCGCAACAACAAAAACTCGAACAAGCACTTAATCAGCCGCAAGGCTTAATTTT AGTGACCGGCCCGACCGGTAGCGGGAAAAGTATCACCCTTTATACGGCGCTGCAATGGCTTAATAGCGCCTCAAAGCATA TAATGACGGCGGAAGATCCCATTGAAATTGAACTTGAAGGGATTATTCAAACCCAAATACAGCCTCAAATAGGCTTGAGT TTCAGCCGACTGCTGCGCACATTTCTACGTCAGGATCCGGATGTCATTATGCTAGGTGAAATCCGTGATGATGAAAGTGC TCAAATGGCATTACGTGCAGCGCAAACCGGGCATTTGGTTCTATCCACCTTGCATACTAACAATGCTTACTCCGCAATTT CACGCTTATTGCAACTGGGAATTAAACAGCATGAAATCGATAATAGCCTGCTCCTTATTATCGCCCAACGCTTAGTGCGA AAGCGTTGCCAAAAGTGCGGTCAATTTTCCGAAAATTTTATCAACTGCGACTGTCATCAAGGTTACCGAGGACGTATCGG CATTTATCAGTTTCTTCATCCCCGGTGGCAAGCTCAGAAATGGCAATATGTCACGGATTTTCCTTCCCTTTATCAGGCGG CAAAAAACAAAGTACAACAACAAATTACCGATAAGCAGGAATTATTGCGCGTATTAGGAAGTGAAAAATGA Protein sequence : MIIKNSDVRLMQSIKIIAGNGEQYMIDHELWQRNQQQQHVLLRYLAVPIKEEEQKLWLAIDNVENIAACETFSFLTGKIV EPVLVSNETLKSLLQPDEPQSLSIEETSLIYTESLSQNKENKNTDEPIIRLLNNIFESALSKNASDIHFEPQKNQLRIRF RIDGVLQQQTPVNLSLAGRIISRLKLLAKLDISETRLPQDGRFDFKTTFAETLDFRISTLATSNGEKIVLRLQQNKPVDF SFEQLGMEPAQQQKLEQALNQPQGLILVTGPTGSGKSITLYTALQWLNSASKHIMTAEDPIEIELEGIIQTQIQPQIGLS FSRLLRTFLRQDPDVIMLGEIRDDESAQMALRAAQTGHLVLSTLHTNNAYSAISRLLQLGIKQHEIDNSLLLIIAQRLVR KRCQKCGQFSENFINCDCHQGYRGRIGIYQFLHPRWQAQKWQYVTDFPSLYQAAKNKVQQQITDKQELLRVLGSEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-53 | 43 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-53 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_087555.1 | GspE protein | VFG2426 | Protein | 5e-58 | 44 |
| gspE | YP_087555.1 | GspE protein | VFG0182 | Protein | 1e-62 | 43 |
| gspE | YP_087555.1 | GspE protein | VFG0112 | Protein | 2e-65 | 43 |
| gspE | YP_087555.1 | GspE protein | VFG1876 | Protein | 2e-57 | 43 |
| gspE | YP_087555.1 | GspE protein | VFG2048 | Protein | 5e-53 | 42 |
