Gene Information

Name : rph (MS0252)
Accession : YP_087444.1
Strain : Mannheimia succiniciproducens MBEL55E
Genome accession: NC_006300
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 229123 - 229845 bp
Length : 723 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGTCCAAATAATAGAGCGGTAAACGAACCGCGCCCGATTAAAATTACCCGTCACTACACAAAACATGCGGAAGGTTC
GGTGCTAGTGGAATTCGGCGATACGAAAGTAATTTGTACGGCGACGGTAGAAGATTCCGTCCCTCGTTTTTTAAAAGGTC
AAGGGCAAGGTTGGGTAACCGCCGAATACGGCATGTTGCCGCGTTCCACTCACAGCCGTATGCTGCGTGAAGCGGCAAAA
GGCAAACAGGGCGGTCGTACCATGGAAATTCAGCGTTTAATTGCGCGTTCATTGCGAGCCATGGTGGATTTAACGGCGTT
AGGCGAACGTTCGATTACCTTAGACTGCGATGTGATTCAGGCTGACGGCGGTACCCGTACCGCATCTATTACCGGCGCTT
GCGTGGCGTTAACCGATGCCATTAATGCATTGGTGGAAAACGGCACTTTAAAAACCAGTCCGCTTAAAGGTTTGGTGGCG
GCCGTTTCCGTCGGGATTGTGAACGGCGAAGCGGTTTGCGACTTAGAATATGTGGAAGATTCCGCAGCGGAAACCGACAT
GAATGTGGTAATGATGGAAGACGGCAGAATGATTGAAGTGCAGGGAACGGCGGAAGGCGAGCCCTTCAGCCATGAAGAAT
TACTAACCCTGTTAAATTTAGCCAAACAAGGGTGCAATATGATTTTTGATGCGCAGCGCAGAGCGTTAGCCGCGGATTGT
TAA

Protein sequence :
MRPNNRAVNEPRPIKITRHYTKHAEGSVLVEFGDTKVICTATVEDSVPRFLKGQGQGWVTAEYGMLPRSTHSRMLREAAK
GKQGGRTMEIQRLIARSLRAMVDLTALGERSITLDCDVIQADGGTRTASITGACVALTDAINALVENGTLKTSPLKGLVA
AVSVGIVNGEAVCDLEYVEDSAAETDMNVVMMEDGRMIEVQGTAEGEPFSHEELLTLLNLAKQGCNMIFDAQRRALAADC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 3e-63 57