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Name : hsdR (MS2171) Accession : YP_089363.1 Strain : Mannheimia succiniciproducens MBEL55E Genome accession: NC_006300 Putative virulence/resistance : Unknown Product : HsdR protein Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 2108030 - 2111092 bp Length : 3063 bp Strand : + Note : Restriction enzymes type I helicase subunits and related helicases DNA sequence : ATGATTACCGAAAAAGACTTTGAAAATGAAATCGAGCGTTTTCTGTTGGCAGAGGGCGGTTATGTGCAAGGCAAGAATAG CGAATACAACAAAGAAACGGCGCTATTTGAAGAAGATGTACTTAGCTTTATTCAAACCACCCAGCCGAAACGTTGGGAAC GGTTGGCGCAAGGGCAGAAAGCCAATGTGAAAGCGGTGCTGATTAAGGCGCTTTGCCAAGAATTGGAGGCAAAAGGTGCG CTTGATGTGTTGCGCCACGGTTTCCGCTGTTACGGTAAAACCTTTCAGACCGCCTATTTTGCGCCGAATACTTCTATTAA TGAGGAAACGCAGCAGCGTTATGACGCCAATATTTTGAAAATTACCCGCCAAGTGGTCACGGAAGATGGCGACCGCCCTG ATATTGTGTTGTCGCTCAACGGCATTCCGGTGGCAACGGCAGAGCTGAAAAATGTGTTGTCCGCCACCCATTGGACGGTG GAAGACGCTATTTATCAATATCGCAAGGAACGTAATCCAAAGGGAAAACTGTTTACCTTTAAAAAACGTACCTTAGTGCA TTTTGCGGTGGATACCGAGGAAGTGTATATGACCACCAAGCTGGACGGCGAACAGACTTATTTTTTACCGTTCAACCGTG GCTACAACAAGGGCAGAGGCAATCCGCCCATAGCGGGGAATGTGAAAACCGCTTATTTGTGGGAGCAGATTTTAACCCGC CACAGCTTTTTGGAAATCATCGCCCGCTTTTTGCATTTGAGTGTGGAAGAAAAGAAAGTCCGTACCGATAGCGGATTAAG GCTCCTGCAAAAAGAAACGATGATTTTCCCGCGTTTCCATCAGCTGGACGCGGTGCGCCAATTGATTGCTCACAGCCGCG AACATGGTGCGGGGCGCAATTACCTGATTCAGCATTCCGCCGGCTCGGGCAAATCGAATACCATTGCTTGGCTGGCACAC CAGCTAAGCAGCCTGCACAACCGTGATGACCAAAAGATTTTTAACTCGGTAATTGTGGTCACCGACCGTGTGGTACTCGA CCGCCAATTACAAGCGACCATCAGCCAATTTGAACATAAAGACGGCGTGGTACAGAAAATCGAGCACAATTCACAGCAGC TTGCGGTAGCGATTGCCAGTGATACCCCGATTATCATTACTACTATCCAAAAATTCCCGTTTGTAATGGCGGCACTTGCC CGCAAGCAAGAGAGCGGAATCAATGTGGCGATTTCTACCGAAGGCAAGCAATTTGCGGTGATTGTGGATGAAGCCCATAG TTCGCAAAGTGGCGAAGCCGCAATGGAATTGCGTAAGGTGCTGAATAAAGACGGCATTGAAGCGGCGGTGATGGCGGAGT TTTTAGACGATGACGATGATGAAACCGGTTTAAGCGATGAAGCCAAAAAACAGCTGTTTATCGAAGCGGCTAAACGTCAG CGCCAGCCGAATTTGAGCTTTTTTGCCTTTACGGCGACACCCAAATGGAAAACCAAGGCTTTATTTGACGAACCGGGCGC AGACGGCAACACACCTTTCCATCATTACACGATGAAGCAGGCGATTGAAGAAGGCTTTATTTTGGATGTCTTGGAAAATT ACGCCACTTGGAAACAGTATTTCAAGCTGCTGAAAATCAGTGAAAACGATAAAGAGCTGAGTAAAAGCAAAGCGAAAAAA GAGATGATGCGCTTTGTGAACCTGCATCCGAGTGTAATTGCACAAAAGGTAGAAATTATTGTCGAGCATTTCCGCACCAC CACCATGCATAAAATCGGCGGGCGGGCGAAAGCGATGGTAGTGACCAACGGTCGGGAGCATGCCGTACGCTACAAATTAG CTTTTGATGAATATATTAAAGAAAAAGGCTATACGGGGATTAAATCTTTGGTGGCGTTTTCAGGCGGTATTACCCTCAAA GAAGCCCCTGAAAAGGAATATACCGAAGCGTTGATGAACGGCATTCGCGAAGTGGATTTGCCCGAGCAGTTTGCTTCCGA GCATTATCAAGTGCTGTTGGTGGCGGAGAAATATCAAACGGGCTTTGACCAGCCGTTGCTGCATACAATGTTTGTGGATA AAAAGCTCAGTGGCATTCAGGCGGTGCAAACGCTCTCCCGCCTAAACCGCTGCGCCAAAGGCAAAACGGATACCTTTGTG CTGGATTTTGTCAATCAGCCCGAAGATATTTACAAGGCATTTAAGCCGTTTTATGAAGTGACTGAATTGGGCGATATTCC AAGTAATGAAAAATTAGATGAACTGGCGGCTACTCTTGACCAGTGGAAAATCTACTTCCAACCGGAAATCCGCCAATTTG CCGAAATTTGGTTTAGCGCCAAACAGCAGCCGACAGGCTCGGAGCATAAACAATTAAACAGTATTTTAGATAAAGCCGTG GCGAGATTTTTAGCGGTGGGCGATGAGATTCAACAAGGGGTTGATGATTTATCCGAGCTGAAAAACGAACAGCAAAATCT GTTTAAAAGCCAATTGAAAAGCTATTTGAGTTTATATCAGTTTGTGTCGCAAATCATGGATTACAGCGATGATCTGCATG AACAACGCTATGTTTACCTGCGCGCACTGCAAAGCAAGCTGCCGAACAACAGCGACCGCAACAAGGTGGATTTAAGCAAA GATGTGGTGCTGCATTTCTATAAACTGCAAAAGCGCAGCGAGGGCAAGATTCACTTGGACGAGGGCGGAGCGGATCCGCT CAAAGGCGCAACCGACGTAGGCTCGGGGCGCGCCGACGCCACTGATGAACTTAGTAATATGGTGCAGGAAATCAATGGAA TGTACGGTACTCAGTTTACAATTGCCGACCAACTTTTCTTTGAACAAATTATCGAAGATGCCTTAGCGGATAATGAAATT GTTGGCGCAGCGAAAAACAACAGCCTTGAAAGCTTTACCGCTTACTTTGCCGATAAACTGCTGGATTTACTGTTTCAACG TATGCAGGGCAATGAAGAAATCAGCAATCAGGTCATGAGTGACGAGAGCTTGAGAAACCGCGTCGTAAAACGCTTGGCGA AGCAGATTTATCAGCGGAAGTGA Protein sequence : MITEKDFENEIERFLLAEGGYVQGKNSEYNKETALFEEDVLSFIQTTQPKRWERLAQGQKANVKAVLIKALCQELEAKGA LDVLRHGFRCYGKTFQTAYFAPNTSINEETQQRYDANILKITRQVVTEDGDRPDIVLSLNGIPVATAELKNVLSATHWTV EDAIYQYRKERNPKGKLFTFKKRTLVHFAVDTEEVYMTTKLDGEQTYFLPFNRGYNKGRGNPPIAGNVKTAYLWEQILTR HSFLEIIARFLHLSVEEKKVRTDSGLRLLQKETMIFPRFHQLDAVRQLIAHSREHGAGRNYLIQHSAGSGKSNTIAWLAH QLSSLHNRDDQKIFNSVIVVTDRVVLDRQLQATISQFEHKDGVVQKIEHNSQQLAVAIASDTPIIITTIQKFPFVMAALA RKQESGINVAISTEGKQFAVIVDEAHSSQSGEAAMELRKVLNKDGIEAAVMAEFLDDDDDETGLSDEAKKQLFIEAAKRQ RQPNLSFFAFTATPKWKTKALFDEPGADGNTPFHHYTMKQAIEEGFILDVLENYATWKQYFKLLKISENDKELSKSKAKK EMMRFVNLHPSVIAQKVEIIVEHFRTTTMHKIGGRAKAMVVTNGREHAVRYKLAFDEYIKEKGYTGIKSLVAFSGGITLK EAPEKEYTEALMNGIREVDLPEQFASEHYQVLLVAEKYQTGFDQPLLHTMFVDKKLSGIQAVQTLSRLNRCAKGKTDTFV LDFVNQPEDIYKAFKPFYEVTELGDIPSNEKLDELAATLDQWKIYFQPEIRQFAEIWFSAKQQPTGSEHKQLNSILDKAV ARFLAVGDEIQQGVDDLSELKNEQQNLFKSQLKSYLSLYQFVSQIMDYSDDLHEQRYVYLRALQSKLPNNSDRNKVDLSK DVVLHFYKLQKRSEGKIHLDEGGADPLKGATDVGSGRADATDELSNMVQEINGMYGTQFTIADQLFFEQIIEDALADNEI VGAAKNNSLESFTAYFADKLLDLLFQRMQGNEEISNQVMSDESLRNRVVKRLAKQIYQRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAS0025 | YP_042158.1 | type I restriction enzyme protein | Not tested | SCC476 | Protein | 2e-163 | 41 |
