Gene Information

Name : tra5 (MS1577)
Accession : YP_088769.1
Strain : Mannheimia succiniciproducens MBEL55E
Genome accession: NC_006300
Putative virulence/resistance : Virulence
Product : Tra5 protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1572146 - 1572931 bp
Length : 786 bp
Strand : -
Note : Putative transposase

DNA sequence : 
GTGTCTGAAAGTGCTTACTACGCCCATTTGCGCACTGCCAAAAAGCCAGCGAAACACACAGCTTTAGCCGTTGAAATCAA
GGCAATTTTTGATGCAAGCCGAAGTTCAGCAGGCAAACGAACGATTCAATCGCATTTGAAAGAGAAAGGTATTTTTGTGG
GGTTGTATTTAATTCGTAAGTTAATGAATAAGCAAGGATTATTTAGTAAGCAACCGCAAAAATGGCGCAATCCTAGTAAA
GGAAACAGTCAAGTTTTTGAGAATATACTAAGTCGAGAATTTACGCCTGATAGCCAAACGACCGTGCTATGTGGTGACAC
GACCTATATAAAAATCAATGGGATATGGTGCTATTTAGCCGTGGTAATTAATTTATTAAATCGTCAAGTCGTCGGTTGGA
AGCTAAGTCGCTATCATGATAGTGAGCTGGTTAAAGATGCACTGAATCATGCGATGCTGAATATTGAACGCACGGAGCGA
ATGTTGTTCCATTCAGACCAAGGTAGTATTTATGGCAGTGAAATCTTTACTGATTCAGTTAAGAAACATGGGCTTACACA
AAGTATGAGCCGTCGTGGTAACTGTTGGGACAATGCGCCGATGGAGCGTTGGTTTCGGAGTTTTAAATATGAATGGATGC
TGAAAGGTGGTTATAGTGATTTTGAAAGTGCTGTAAATGATGTGAGAGAATATGTGATGTATTATAATCACATTCGCCCA
CATAGCTATAATCAAGGTCTATCTCCGATTTTAGCAAAAACAACTTATCGGAGACTGTTAAATTAG

Protein sequence : 
MSESAYYAHLRTAKKPAKHTALAVEIKAIFDASRSSAGKRTIQSHLKEKGIFVGLYLIRKLMNKQGLFSKQPQKWRNPSK
GNSQVFENILSREFTPDSQTTVLCGDTTYIKINGIWCYLAVVINLLNRQVVGWKLSRYHDSELVKDALNHAMLNIERTER
MLFHSDQGSIYGSEIFTDSVKKHGLTQSMSRRGNCWDNAPMERWFRSFKYEWMLKGGYSDFESAVNDVREYVMYYNHIRP
HSYNQGLSPILAKTTYRRLLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 2e-34 42
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 2e-34 42
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 1e-33 41
unnamed AAC31485.1 L0006 Not tested LEE Protein 8e-34 41
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 8e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tra5 YP_088769.1 Tra5 protein VFG1484 Protein 1e-34 42