|
Name : serS (MS1450) Accession : YP_088642.1 Strain : Mannheimia succiniciproducens MBEL55E Genome accession: NC_006300 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1444405 - 1445697 bp Length : 1293 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATCGACCCGAATTTACTGCGTAATAATCTTGCGGAAGTTGCAGCGACATTAAAATTAAAACGTAACTTCATTTTAGA TACAAAAGAATTAGCTGAATTAGAAGAACAACGTAAAGCCCTGCAGGTTGAAACCGAAACCCTGCAAGCCAAACGTAATG CGCGTTCAAAAGCGGTTGGTGCGGCAAAAGCGCGCGGCGAAAATATTGCGCCTTTATTAGCAGAAATGGACGATATGGGG CACGAGTTAGCGACAGTAAAAGCGGAACTGGACGAAATACTCGCCGAACTCAACACCATTGCGTTAACTATTCCTAATTT GCCGGCGGACGAAGTGCCGTTAGGTAAAGACGATTCGGAAAATAAAGAAATTTCACGCTGGGGAACACCGAGACAATTTG ATTTTGAAATTAAAGATCACGTGACTTTAGGTGAAAATCTTGCCGGCGGTATAGATTTTGCCGCCGGTGCGAAATTAAGC GGTGCGCGTTTTGCGGTTATGAAAGGACAAGTGGCAAAAATGCACCGTGCGCTGGCCCAATTTATGTTGGACTTGCATAC CGAGCAACATGGCTACACGGAAACTTATGTGCCTTATTTAGTTAACCATACTACTTTATACGGCACGGGTCAGTTACCGA AATTCGGTGAAGATTTATTCCACACTACGCCGTTAGAAGGCGAAGTGCCTTACGCATTAATTCCGACCGCCGAAGTGCCG GTCACCAATTTAGTGCGTGATGAAATCCTGAACACGGAAGATTTGCCGATTCGTATGACGGCGCATACGCCTTGTTTCCG TTCCGAAGCGGGTTCTTACGGTCGCGATACACGCGGTTTAATTCGTATGCATCAATTCGATAAAGTTGAAATGGTGCAAA TTGTTGACCCGGATAAATCCATGGAAGCATTGGAAGAGCTAACCGCTCATGCGGAAAAAGTACTACAGCTGTTAGGTTTG CCATACCGTAAAATGTTGTTATGTACCGGCGATATGGGGTTCGGTTCATGCAAAACTTATGATTTAGAAGTTTGGGTACC GGCGCAGGATACTTACCGTGAGATTTCTTCCTGTTCTAATATGTGGGATTTCCAAGCCCGCCGTATGCAGGCTCGCTGCC GTTCCAAAACCGATAAAAAAACGCGTTTGGTGCATACTCTAAACGGTTCCGGTTTGGCGGTCGGTCGCACCTTGGTTGCG GTGTTGGAAAACTACCAAAATGAAGACGGCTCGGTAACCGTACCGGAAGTATTGCGTCCGTATATGGGCGGCTTAGAAGT GATTGGCAAATAA Protein sequence : MIDPNLLRNNLAEVAATLKLKRNFILDTKELAELEEQRKALQVETETLQAKRNARSKAVGAAKARGENIAPLLAEMDDMG HELATVKAELDEILAELNTIALTIPNLPADEVPLGKDDSENKEISRWGTPRQFDFEIKDHVTLGENLAGGIDFAAGAKLS GARFAVMKGQVAKMHRALAQFMLDLHTEQHGYTETYVPYLVNHTTLYGTGQLPKFGEDLFHTTPLEGEVPYALIPTAEVP VTNLVRDEILNTEDLPIRMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDKSMEALEELTAHAEKVLQLLGL PYRKMLLCTGDMGFGSCKTYDLEVWVPAQDTYREISSCSNMWDFQARRMQARCRSKTDKKTRLVHTLNGSGLAVGRTLVA VLENYQNEDGSVTVPEVLRPYMGGLEVIGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-106 | 56 |
