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Name : amyA (MS1236) Accession : YP_088428.1 Strain : Mannheimia succiniciproducens MBEL55E Genome accession: NC_006300 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.93 Position : 1234059 - 1235681 bp Length : 1623 bp Strand : - Note : Glycosidases DNA sequence : ATGAACGATAACTGGTGGAAAAACGGGGTAATTTATCAGATTTACCCGAAAAGTTTTCAGGACACGACAGGTTCCGGTAC CGGTGATATTCAGGGAATTATTAAGCGCTTGGATTATCTGCAAACTCTGGGTATTGACGGTATCTGGATTACTCCGATGT ATGTTTCGCCGCAAATTGATAACGGTTATGACATCGCCGATTACCGTAATATCGACCCGAGTTACGGTACGATGGCGGAT TTTGAGCAACTGATTGCCGAGGCGCATAAGCGTGATATCCGTATTGTGATGGATATGGTATTCAATCACAGCTCAACTTT TCACCAATGGTTTAAGCAGGGCGAAGATCCGAACAGCGAGTACCACGACTATTATATTTGGCGCGAGCAGCCGACTAATT GGCAATCCAAATTCGGCGGTAATGCGTGGAAATGGTCGGATAAGGCGCAAAAATATTACCTGCATTTATTTGCGCCGGAG CAGGCGGATCTTAACTGGGAAAATCCTAAATTACGCGCCGAACTGTACGATATTTGTCGTTTCTGGGCGGAAAAGGGCGT GGACGGCTTGCGTCTGGATGTCGTCAACCTGATTTCCAAGCCGGAAAAATATGAGGACGATTTTGAGGGTGACGGTCGCC GCTTTTATACCGACGGGCCGAAAATCCACCAATATCTGCAAGAATTGAATCAAAATGCGTTAAAACCTTTCGGTTTGATG ACGGTGGGCGAAATGTCTTCGACTAAACTGGAACATTGTCAGCGCTACGCCAATCTGGACGGCTCCGAGTTATCGATGAC CTTCAATTTCCATCATCTCAAAGTAGATTATCCGAACGGTGAAAAATGGACTTATGCCAAACCGGATTATGTAGAGCTTA AATCGATTTTCAACTACTGGCAAAAGGGTATGCATGGTAAAGCGTGGAATGCGCTGTTTTGGTGCAACCACGACCAGCCG CGTATTGTTTCCCGTTTCGGCGATGAAGGCGAACTGCGCACCCTGTCCGCCAAAATGCTGGCGATGTTATTACACGGAAT GCAGGGTACGCCGTATATCTATCAAGGTGAAGAAATCGGTATGACTAACCCGAATTTCTCTTCCATTGAAGAGTATCGCG ATGTAGAAAGTCTGAATGCCTATCAAATTCTGCAAAATCAGGGAAAAAGTGCGGTTGAAATTTTGCAGATTTTAGCGCAA AAATCACGTGATAATTCGCGTACGCCGGTACAATGGGACGCTTCGCCGAATGCCGGTTTTACCAGTGCTACGCCGTGGAT TGGCGTGGCTAAAAATTATCCGCAAATCAACGTCGAACAGGCGTTGGCGGATAGAGATTCGGTATTTTATACCTATCAAA AATTGATTGCGTTACGTAAACAATTAGCGGTATTAACCGACGGCGATTATAGTGATCTTCTACCGAACCATGAGTCCGTA TGGCTGTATCAACGTTCGACTGCCGGTGAGCGGTTAACGGTTGCGGCTAATTTGAGCAATCAGCCGCAATTTATCGAAAT AAAACCGCAAGGTCAGGTGTTAATCAACAATTATGCGGATATAACCCAAGAAGACTCCGGCATTTGTTTAAAACCTTACC AGGCGCTGTATTTCCTAGCTTAA Protein sequence : MNDNWWKNGVIYQIYPKSFQDTTGSGTGDIQGIIKRLDYLQTLGIDGIWITPMYVSPQIDNGYDIADYRNIDPSYGTMAD FEQLIAEAHKRDIRIVMDMVFNHSSTFHQWFKQGEDPNSEYHDYYIWREQPTNWQSKFGGNAWKWSDKAQKYYLHLFAPE QADLNWENPKLRAELYDICRFWAEKGVDGLRLDVVNLISKPEKYEDDFEGDGRRFYTDGPKIHQYLQELNQNALKPFGLM TVGEMSSTKLEHCQRYANLDGSELSMTFNFHHLKVDYPNGEKWTYAKPDYVELKSIFNYWQKGMHGKAWNALFWCNHDQP RIVSRFGDEGELRTLSAKMLAMLLHGMQGTPYIYQGEEIGMTNPNFSSIEEYRDVESLNAYQILQNQGKSAVEILQILAQ KSRDNSRTPVQWDASPNAGFTSATPWIGVAKNYPQINVEQALADRDSVFYTYQKLIALRKQLAVLTDGDYSDLLPNHESV WLYQRSTAGERLTVAANLSNQPQFIEIKPQGQVLINNYADITQEDSGICLKPYQALYFLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 8e-126 | 46 |
