Gene Information

Name : pdxS (BL02353)
Accession : YP_077293.1
Strain : Bacillus licheniformis DSM 13
Genome accession: NC_006270
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 19213 - 20097 bp
Length : 885 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGGCTCAAACAGGTACTGATCGCGTAAAACGCGGTATGGCAGAAATGCAGAAGGGCGGCGTCATTATGGACGTTGTCAA
TGCTGAACAAGCAAAAATCGCAGAAGAAGCAGGAGCCGTCGCAGTCATGGCGCTGGAGCGCGTTCCGGCTGATATCCGTG
CGGCAGGCGGAGTTGCCCGCATGGCAGATCCGACTATTGTCGAAGAAGTGATGAACGCTGTTTCAATCCCGGTTATGGCA
AAAGCACGCATCGGGCATATCGTTGAAGCGCGTGTTCTTGAAGCGCTTGGCGTTGACTATATTGATGAAAGTGAAGTTTT
GACTCCTGCAGATGAAGAATTTCATTTAAATAAAAACGAATTTACCGTTCCATTTGTATGCGGATGCCGCGACCTAGGAG
AAGCGACGCGCCGGATCGCTGAAGGAGCTTCAATGCTTCGTACAAAAGGCGAACCTGGTACGGGCAATATTGTGGAAGCT
GTCCGCCATATGAGAAAGGTGAATGCTCAAGTGCGCAAAGTAGTCGGCATGAGCGATGACGAACTGATGACAGAAGCGAA
AAACCTCGGCGCTCCTTATGAGCTGCTGAAGGAAATTAAAGCCGAAGGACGCCTTCCGGTTGTCAACTTTGCTGCCGGCG
GTGTAGCAACACCTGCTGATGCTGCTCTAATGATGCAGCTTGGCGCTGACGGCGTATTCGTAGGGTCCGGTATTTTCAAA
TCCGACAACCCTGCAAAATTCGCGAAAGCAATCGTAGAAGCGACGACGCATTTCACGGATTACAAGCTGATTGCCGAGCT
TTCAAAAGAGCTTGGAACTGCGATGAAAGGGATTGAAATCTCAAATCTGCTGCCAGAACAGCGTATGCAAGAGCGCGGCT
GGTAA

Protein sequence :
MAQTGTDRVKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMA
KARIGHIVEARVLEALGVDYIDESEVLTPADEEFHLNKNEFTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEA
VRHMRKVNAQVRKVVGMSDDELMTEAKNLGAPYELLKEIKAEGRLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFK
SDNPAKFAKAIVEATTHFTDYKLIAELSKELGTAMKGIEISNLLPEQRMQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 4e-84 64
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-84 64
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-84 64