Gene Information

Name : clpE (BL03640)
Accession : YP_078710.1
Strain : Bacillus licheniformis DSM 13
Genome accession: NC_006270
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease-like (class III stress gene) ClpE
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1498426 - 1500522 bp
Length : 2097 bp
Strand : -
Note : -

DNA sequence :
ATGCGTTGTCAACATTGTCAAAAAAATGAGGCGACGATTCGCCTAAACATGCAAATCAACTTTACAAAAAAACAAATGGA
TTTATGTGAAGACTGCTATAAAGAGCTGACTCAGCCTTCTATGTTTTCAGGAAATCACTTTTTTGGCGGCGGAGGTTCTT
TCTTCAGCCAGCCATCACAAGCGCAGACGCAAACCGCTGCCAAAAAAGGCTTGCTCGATGAACTTGCCGTCAATTTAACA
AATGCAGCAAAGACCGGCTTGATCGATCCGGTGATCGGCCGCGATGATGAAGTAGCCCGTGTGATCGAGATCTTAAACCG
CAGAAATAAAAACAATCCGGTCTTAATCGGTGAACCGGGCGTCGGTAAAACAGCCGTCGCTGAAGGACTTGCTCTCAAAA
TCGCCGAAGGCGATGTTCCAAATAAATTGAAAAACAAAGAGCTCTACCTGCTTGATGTCGCTTCCCTCGTGGCAAACACC
GGCATCAGAGGGCAATTTGAAGAAAGAATGAAACAGCTGATGAAAGAGCTGAAAGAACGCAAAAACGCAATCTTGTTTAT
TGACGAAATTCACCTTCTTGTCGGGGCCGGCTCTGCAGAAGGCTCCATGGATGCGGGCAACATTTTAAAACCTGCACTTG
CCAGAGGCGAGCTGCAAGTTATCGGCGCTACGACGTTGAAGGAATATCGCCAAATTGAAAAAGATGCGGCGTTAGAGCGG
CGCTTTCAGCCGATCATGGTGCACGAACCGACAATTGAGCAGGCCGCAGCGATTTTAAACGGGCTCAAGGAAAAATACGA
AGCATATCACGATGTGACTTACACGGATGAAGCGATCAAAGCCTGCGTCATTCTGTCAAGCCGCTATATTCAGGACCGCC
ATCTTCCCGATAAGGCGATCGACCTTTTGGATGAAGCCGGTTCAAAAGCGAACTTGAAAATCGACACGGTCAGCGGTGAA
CAAGCTTCCCAACGCCTGCAAGAAATCGAAGCGGAAAAAGCCAAAGCGCTTCAAGAAGAAAACTACGAGCTTGCAGCAAA
ACTCCGCGACGAAGAAGAAGCGCTGCATAAAAAAATGGAAAGCCATGAGGAAGAAAAACGGGCAACAGTTGAAGCGGAAG
ACATTCAAGCGATCATCGAACAAAAAACCGGCATTCCGGTCGGCAAGCTTCAGCACGACGATCAGAAGAAAATGAAAGAG
CTTGAAGCACACCTTTCAAGCCGCGTGATCGGTCAAAAAGAAGCGGTGAAAAAAGTGGCAAAAGCCGTCAGAAGAAGCCG
CGCCGGCCTGAAATCAAAAAACAGGCCTGTCGGTTCATTCCTGTTCGTCGGCCCGACAGGTGTCGGTAAAACAGAACTTT
CTAAAAGGCTTGCGGAAGAACTGTTCGGCACGAAGGATGCCATCATCCGCCTCGATATGAGCGAATACATGGAAAAACAC
GCCGTATCAAAGCTGATCGGTTCGCCTCCTGGATATGTCGGCCACGAAGAAGCCGGACAGCTTACCGAAAAAGTCCGGAG
GAACCCGTACAGCATCGTTTTGCTCGATGAAATCGAAAAAGCCCATCCCGATGTCCAGCACATGTTCCTGCAAATCATGG
AAGACGGACGTCTGACAGACAGCCAAGGGCGGACGGTCAGCTTTAAAGATACCGTCATTATTATGACAAGCAATGCCGGT
GTATCTGAAAAGCGGACAACCGTCGGTTTTAACCGGGAAGAGCAAGTAATGGGCGAACAATCAATGATCGATTCATTAAG
CGGCTACTTTAAGCCGGAATTCCTGAACAGATTTGACAGCATCATCGAATTCCAGCCGCTCGAAAAAGAAGATCTGGTCA
AGATCGCCGCCCTCTTGCTGAAAGAGCTTGAAGAAACGTTAAAAGAGCAAAACATGACGCTCGAAGTTTCAGATGAGGCA
AAAGAAAAAATCGCTGAAATCGGATACCATCCGGCCTTTGGCGCCCGCCCATTAAGAAGAACCATTCAAACAGCGGTCGA
AGATCAAATGACCGATCTGCTGCTTGAAGAAGAACACATCAAAGGTTTTGCGGTTATCGTTGAAAACGATGAAATCCGGG
TGAAAACAACCAGATAA

Protein sequence :
MRCQHCQKNEATIRLNMQINFTKKQMDLCEDCYKELTQPSMFSGNHFFGGGGSFFSQPSQAQTQTAAKKGLLDELAVNLT
NAAKTGLIDPVIGRDDEVARVIEILNRRNKNNPVLIGEPGVGKTAVAEGLALKIAEGDVPNKLKNKELYLLDVASLVANT
GIRGQFEERMKQLMKELKERKNAILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALER
RFQPIMVHEPTIEQAAAILNGLKEKYEAYHDVTYTDEAIKACVILSSRYIQDRHLPDKAIDLLDEAGSKANLKIDTVSGE
QASQRLQEIEAEKAKALQEENYELAAKLRDEEEALHKKMESHEEEKRATVEAEDIQAIIEQKTGIPVGKLQHDDQKKMKE
LEAHLSSRVIGQKEAVKKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKRLAEELFGTKDAIIRLDMSEYMEKH
AVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSNAG
VSEKRTTVGFNREEQVMGEQSMIDSLSGYFKPEFLNRFDSIIEFQPLEKEDLVKIAALLLKELEETLKEQNMTLEVSDEA
KEKIAEIGYHPAFGARPLRRTIQTAVEDQMTDLLLEEEHIKGFAVIVENDEIRVKTTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 4e-146 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpE YP_078710.1 ATP-dependent Clp protease-like (class III stress gene) ClpE VFG0080 Protein 0.0 62
clpE YP_078710.1 ATP-dependent Clp protease-like (class III stress gene) ClpE VFG0079 Protein 3e-152 54