|
Name : clpC (BL03261) Accession : YP_077372.1 Strain : Bacillus licheniformis DSM 13 Genome accession: NC_006270 Putative virulence/resistance : Virulence Product : class III stress response-related ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 102543 - 104975 bp Length : 2433 bp Strand : + Note : - DNA sequence : ATGATGTTTGGAAGATTCACAGAAAGAGCACAAAAAGTATTGGCGCTTGCTCAAGAAGAAGCTCTGCGTCTGGGCCATAA TAACATTGGAACAGAACATATTCTCCTCGGCCTTGTCCGCGAGGGAGAAGGAATTGCTGCGAAAGCGCTGCAGGCGTTAG GACTCAGCCCTGACAAGATTCAAAAAGAAGTTGAAAGCCTCATCGGCCGCGGACAAGAAATGTCACAATCGATCCATTAC ACACCGAGAGCCAAGAAAGTGACCGAATTGGCGATGGATGAAGCGAGAAAGCTTGGCCACTCCTACGTTGGAACTGAACA CATCCTCCTTGGCTTAATCCGCGAAGGGGAAGGTGTTGCGGCAAGGGTGCTGAATAATTTAGGCGTCAGCTTAAACAAAG CGAGACAGCAAGTATTGCAGCTGTTGGGCAGCAATGAGAGCGGAGGCGCTGCTTCAGGCGCCAACAGTAGCGCCAACACA CCAACTTTAGACAGTCTTGCCCGGGATCTCACGGCGATTGCAAAAGAAGACAGCCTTGATCCCGTGATCGGCAGAAGCAA AGAAATTCAACGCGTGATTGAAGTGTTGAGCCGCAGAACGAAAAATAACCCTGTGTTAATCGGGGAGCCTGGTGTCGGTA AGACTGCGATTGCCGAAGGCCTGGCCCAGCAGATCATCAATAACGAAGTACCGGAGATTTTACGCGACAAGCGCGTCATG ACACTTGATATGGGAACGGTTGTCGCCGGCACGAAATATCGCGGTGAATTTGAAGACCGCCTGAAAAAAGTGATGGACGA AATTCGTCAAGCGGGAAATATCATCCTCTTCATCGATGAGCTGCATACTCTCATCGGAGCCGGAGGAGCGGAAGGGGCCA TCGATGCCTCCAATATCCTTAAACCGTCGCTGGCGCGCGGAGAGCTGCAATGCATCGGGGCGACAACCCTTGATGAATAC CGCAAATACATTGAAAAAGATGCTGCACTAGAACGGCGTTTTCAGCCGATTCAGGTTGACCAGCCGTCTCCTGAAGAAAG CATTCAAATATTGAAAGGGCTCAGAGACCGCTATGAAGCCCATCACCGCGTATCGATTACGGATGAAGCGATCGAAGCGG CAGTAAAGCTGTCAGACCGCTACATTTCGGACCGTTTTCTGCCTGACAAGGCGATCGACTTAATCGATGAAGCCGGCTCA AAGGTTAGACTGCGTTCATTCACAACGCCTCCTAACTTAAAAGAGCTTGAACAAAAGCTTGATGAGGTAAGGAAAGAAAA AGATGCCGCTGTTCAAAGCCAGGAATTCGAAAAAGCAGCGTCTTTACGTGATACGGAGCAGCGCTTGCGTGAACAGGTCG AAGAAACCAAGAAAACCTGGAAAGAAAAGCAAGGTCAAGAAAATTCCGAAGTGACCGTCGACGATATTGCAATGGTTGTA TCAAGCTGGACCGGAGTGCCGGTTTCCAAAATTGCGCAGACCGAAACAGACAAATTGCTGAACATGGAGAGCATTCTTCA TTCCCGCGTTATCGGCCAGGATGAGGCTGTCGTTGCAGTTGCAAAAGCAGTCAGACGCGCGCGTGCCGGCTTAAAAGATC CAAAACGTCCTATCGGTTCGTTTATTTTCCTTGGCCCAACAGGCGTAGGGAAAACGGAGCTTGCCCGTGCACTTGCCGAG TCCATTTTCGGCGATGAAGAAGCAATGATTCGCATCGATATGTCCGAGTACATGGAAAAACATTCAACATCAAGACTCGT CGGTTCACCTCCTGGATATGTCGGCTATGATGAAGGCGGACAGCTCACTGAAAAAGTGAGAAGAAAACCGTATTCCGTCG TCTTGCTTGATGAAATCGAGAAAGCTCACCCAGATGTCTTCAATATTTTGCTGCAGGTGCTTGAAGACGGCCGCCTGACT GATTCAAAAGGGCGCACGGTTGACTTTAGGAATACGATTTTGATCATGACATCAAACGTCGGTGCGAGCGAACTGAGAAG AAATAAATACGTCGGGTTTAATGTCCAGGATGAAACCCAGAATTATAAAGATATGAAAGACAAAGTCATGGGTGAACTAA AACGCGCCTTTAGACCTGAATTTATCAACCGGATTGATGAGATCATCGTCTTCCACTCTTTGGAGAAAAAACATTTGAAA GATATTGTATCCCTCATGTCAGACCAATTGACCAAGCGTCTGAAAGAACAGGATCTTTCAATTGAGCTGACTGAAGCGGC TAAAGAAAAAATCGCCGATGAAGGCGTGGATCTCGAATACGGAGCGCGTCCTCTCAGAAGAGCAATCCAAAAACACGTGG AAGACCGGCTGTCAGAAGAGCTCCTAAAAGGCCATATTCAAAAAGGCCAGCATATTGTTTTGGATGTAGAAGACGGAGAA TTTGTCGTAAAAACCGAAGCTAAAACGAACTAA Protein sequence : MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMSQSIHY TPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGAASGANSSANT PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY RKYIEKDAALERRFQPIQVDQPSPEESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGQENSEVTVDDIAMVV SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT DSKGRTVDFRNTILIMTSNVGASELRRNKYVGFNVQDETQNYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLK DIVSLMSDQLTKRLKEQDLSIELTEAAKEKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGHIQKGQHIVLDVEDGE FVVKTEAKTN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 58 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-97 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_077372.1 | class III stress response-related ATPase | VFG0079 | Protein | 0.0 | 79 |
| clpC | YP_077372.1 | class III stress response-related ATPase | VFG0080 | Protein | 1e-150 | 54 |
