Gene Information

Name : STH856 (STH856)
Accession : YP_074685.1
Strain : Symbiobacterium thermophilum IAM 14863
Genome accession: NC_006177
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 967592 - 968209 bp
Length : 618 bp
Strand : +
Note : -

DNA sequence :
GTGGTGGCCGTGGCGCCGCTTAGCGGGCGCATCGCACGGGGCGAGTTCGTCATGATCACGGGCCGCTCCGGGGCGGGTAA
GTCCACGCTTCTTGCCCTGATGGGCGGCCTGACCCGGCCGGACGGGGGCCGGGTGACGGTGATGGGCCAGGACCTGTGGG
CGCTCTCCGACGCGGAGCGCGCCCGTTTCCGCGCCCGGCACATCGGCTTCGTCTTCCAGTTCGCCAGCCTGATCCCGACC
CTGACCGTGCTGGAAAACCTCCTGATCCCCGCGTCGTTCCTGCCCCCCGGCGAGGGCGGCGACCGCAAGCGGGCCCTGGA
GCTCCTGGAGCGGGTCGGCCTGCCCGACTGCGCCGACCGGCTCCCGTGGCAGCTGTCGGGCGGCCAGCAGAAGCGGGTGG
CCGTGGCGCGGGCCCTGCTCAACCGGCCGGAGGTGCTCCTGGCTGACGAGCCGACGGCCGATCTGGATGAGGAGACCGAG
CGGGCCATCGTCGAGCTGTTCGTGGAGGAAAACCGGGCCGGGACCACCGTCGTCATGGTCACGCACAACAAGGATCTGGT
GCCCTTTGCCAGCCGCCACCTCATCCTGAACGCGGGGCAGGTGCATCTGGCGTCGTGA

Protein sequence :
MVAVAPLSGRIARGEFVMITGRSGAGKSTLLALMGGLTRPDGGRVTVMGQDLWALSDAERARFRARHIGFVFQFASLIPT
LTVLENLLIPASFLPPGEGGDRKRALELLERVGLPDCADRLPWQLSGGQQKRVAVARALLNRPEVLLADEPTADLDEETE
RAIVELFVEENRAGTTVVMVTHNKDLVPFASRHLILNAGQVHLAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 7e-24 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STH856 YP_074685.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-24 46
STH856 YP_074685.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-33 43
STH856 YP_074685.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-33 41
STH856 YP_074685.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 2e-24 41
STH856 YP_074685.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-35 41