|
Name : STH848 (STH848) Accession : YP_074677.1 Strain : Symbiobacterium thermophilum IAM 14863 Genome accession: NC_006177 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : - Position : 960268 - 962892 bp Length : 2625 bp Strand : + Note : - DNA sequence : ATGCCAAAGCCTGAGAAACTGCTCCTTCTCGACGGCAACAGCCTGGCTAACCGGGCGTTCTACGCCCTGCGGCTCTTCTC CACCAGCGACGGTGTGTACACCAACGCCGTCTACGGGTTTCTGACGATGCTGTTCAAGCTCCTGGACGAGGAGCAGCCCG ACTACGTGGCGGTCGCCTTCGACAAGGGCCGCCAGACCTTCCGCACCGCCCTCTACGAGGACTACAAGGCGACGCGCAAG GCGCCGCCCGACGAGTTCCGGCCGCAGCTGGACCTGCTGCGGGAGGTCCTGACCGCCCTCAACATCCCCTGGTTCCGGGT GGAGAACTACGAAGCGGACGACATCATGGGCACCCTCGCCCGACAGGCCGCCGCCGAGGGGTTGCACACCCTGATCGTCA CCGGCGACCGGGACGCGCTGCAGCTGATCAGCGACCGGGTGACGGTGGTGATGACCAAGAAGGGCATCACCGAGACCGTC CGGTACGATCCCGAGACCCTGAAGGCCGAGTACGGGCTGACGCCCAGCCAGATCATCGACCTGAAGGCCCTGATGGGCGA CGCGTCCGACAACATCCCCGGCGTGCCGGGGGTCGGCGAGAAGACGGCGCTGAAGCTGCTCGCCGACTACGGCACGGTGG ACGGGGTGTACGCGCACCTGGACGAGATCAAGGGCGCGCTGCAGGCCAAGCTGCGGGAGAACCGGGACAAGGCCGAGCTC TCCCGCACGCTGGCCACGATCAACCTGGACGCGCCGGTGACCTTCGACCGGGAGGCGCTGCGCCGGCGAGAGCCCAACTA CCCGCAGGCCTACGCGCTCTTCCAGCGGCTGGAGTTCAAGTCGCTGCTGAGCCGCGTGACCCCGCCCGATGGCACCGTTG CCGCGGAGGCCCTCGCCGAACAGGCCGGGGCCGCGCAGGTGGAGATCGTCGCCGCGCGGGTGGTGGACAGGCCGGGGGCT CTGCGCCTGTCCGGTCAGGCGCCCGTGCTGGCCCGGATGACCGCCGACCCGGGGAATCCCGGCCGTCCCCGCCCGGTGGG GCTGGCGATGGGAGATCCGCCCGCCTGGCTGGAGGGTGAGGCCCTGGCGGATCCGGCAGAGCTGCTGGATTCCGGCGCCC GGCTCGTCGGCCACGACCTGAAGCCCCTGTACAACTGGCTGTACAGCCAGGGGATCGAGCCACCCGCCCCCGCCTTCGAC ACCGCGCTGGCGGCCTACCTGCTTGATCCCTCCCGGTCCAGCTACGACCTCGCCGACCTCTGCCGCCAGCACGGCCTGGG CGAGCTGCCTCCCGGCGACACCCCGGACCTGTGGGCGACCCGTGCCTCGGTGTTGCCCGAACTGCACCGGCGGATGGAGG CGGAGCTGGCGGCGCAGGGCGTGGACCGGCTCTACCGGGAGGTCGAGCTGCCGCTCATGCCCATCCTGGCCGAGATGGAG GCCGTGGGCGTCGGCATCGACCCGGCGGCGCTGCACGAGATGTCGGTGGAGCTGGAGCGGCGCATCCTGCAGGTGAGTCA GGAGATCTACGAGCTGGCCGGCATGCAGTTCAACATCAGCTCGCCGAAGCAGCTGGGCGACGTGCTCTTCGGGAAGCTGG GCCTCCCCAGCGGCAAGAAGACGAAGAGCGGCGGTTACTCCACCGACGCCGAGGTCTTGGAGGAGCTGGCGGCGGCCTAC CCCATCGCCGCGCGGGTCCTCGACTACCGCACGCTCACCAAGCTGAAGGGCACCTACGTGGACGCCCTGGGCCAGCTGAT CGCCCGGGACGGCCGCATCCACACCACCTTCGCACAGACGGTGGCTGAGACAGGCCGCCTCTCCAGCAAGGATCCCAATC TGCAGAACATCCCCATCCGCATCGAGGAGGGGCGGCGCATCCGCAAGGCCTTCGTCGCCCGGCCCGGGTGCGTGCTGCTC TCGGCCGACTACTCGCAGATCGAGCTCCGGGTCGTGGCCCACTTCTCCGGCGACCCGGCCCTCAGGGAAGCCTTCCTGCA CGACCAGGACATCCACACCCGCACCGCGGCCGAGGTCTTCGGCGTCCCCATGGACCAGGTCACCCCGGAGATGCGCCGGC AGGCCAAGGCGGTCAACTTCGGGCTGATCTACGGCCAGACCGACTTCGGGCTGGCCCGGTCGGTGGGGATCAGCCGGGCT GAGGCCAGGGCGTTCATCGAGACCTACTTCGCCAAGTTCGCGGGCGTCAGGCGTTACATGGAGGAGAAGAAGGCGGAGGC CCGGGAGAAAGGGTATGTGACCACCCTCGACGGCCGCCGGCGCCCCCTGCCCGAGATCAACCACCGGGTGTTCACCATCC GGCAGAACGCCGAGCGGATGGCCATCAACACGCCGATCCAGGGCACCGCCGCCGACCTGATGAAGCGGGCGATGATCGCC GTCCGGCGGGCCATGCGGGAGGAGGGGCTTTCCGCCCGGATGATCCTGCAGGTTCACGACGAGCTGGTGTTCGAGTGCCC CGTCGGCGAGGTGGACCGGCTGGCCCGGCTGGTCCGGCGGGAGATGGAGGGGGCCATGAAGCTGGACGTGCCGCTGAAGG TCGAGGTCAAGGTCGGGCCCGACTGGTACTCGGTGCAGCCGTACGAGGGCGATCGGGATGCCTGA Protein sequence : MPKPEKLLLLDGNSLANRAFYALRLFSTSDGVYTNAVYGFLTMLFKLLDEEQPDYVAVAFDKGRQTFRTALYEDYKATRK APPDEFRPQLDLLREVLTALNIPWFRVENYEADDIMGTLARQAAAEGLHTLIVTGDRDALQLISDRVTVVMTKKGITETV RYDPETLKAEYGLTPSQIIDLKALMGDASDNIPGVPGVGEKTALKLLADYGTVDGVYAHLDEIKGALQAKLRENRDKAEL SRTLATINLDAPVTFDREALRRREPNYPQAYALFQRLEFKSLLSRVTPPDGTVAAEALAEQAGAAQVEIVAARVVDRPGA LRLSGQAPVLARMTADPGNPGRPRPVGLAMGDPPAWLEGEALADPAELLDSGARLVGHDLKPLYNWLYSQGIEPPAPAFD TALAAYLLDPSRSSYDLADLCRQHGLGELPPGDTPDLWATRASVLPELHRRMEAELAAQGVDRLYREVELPLMPILAEME AVGVGIDPAALHEMSVELERRILQVSQEIYELAGMQFNISSPKQLGDVLFGKLGLPSGKKTKSGGYSTDAEVLEELAAAY PIAARVLDYRTLTKLKGTYVDALGQLIARDGRIHTTFAQTVAETGRLSSKDPNLQNIPIRIEEGRRIRKAFVARPGCVLL SADYSQIELRVVAHFSGDPALREAFLHDQDIHTRTAAEVFGVPMDQVTPEMRRQAKAVNFGLIYGQTDFGLARSVGISRA EARAFIETYFAKFAGVRRYMEEKKAEAREKGYVTTLDGRRRPLPEINHRVFTIRQNAERMAINTPIQGTAADLMKRAMIA VRRAMREEGLSARMILQVHDELVFECPVGEVDRLARLVRREMEGAMKLDVPLKVEVKVGPDWYSVQPYEGDRDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 3e-155 | 43 |
