Gene Information

Name : STH838 (STH838)
Accession : YP_074667.1
Strain : Symbiobacterium thermophilum IAM 14863
Genome accession: NC_006177
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 944874 - 946628 bp
Length : 1755 bp
Strand : +
Note : -

DNA sequence :
ATGCTGCGAAAGACGAAGATCGTGGCCACCATCGGCCCGGCCAGCGAGCAGGTGGAGGTGCTGACCCGGCTGATCGAGGC
GGGTGTCGATGTCTGTCGGCTCAACTTCAGCCACGGCACCCTCGACGAGCAGAGGCGCCGGATCGAGAACATCCGTGAGG
CCGGCCGCCGGGTGGGCAAGGACGTCGCGATCATGATCGACCTGAAGGGGCCCGAGATCCGCATCGGAACGTTCGAGAAC
GGCAAGGTCACGCTGCGGGACGGGGACCTCTTCACCCTGACCACGGAGCCTTGCGTCGGCAACCAGGAGCGGGTCTGGGT
CCAGTACCCCGGGATCGTTCACGACGTGGCCGAGGGCGGGTACCTGCTGCTGGATGACGGCAACCTGACGTTCCAGGCGG
TGGAGGTGACGCCCACCGAGATCCGTTGCCGGGTGATCGTCGGCGGCGTCCTGTCCGACCGCAAGAAGGTGAACCTGCCC
GGCACGAAGGTCTCGCTGCCCGCGCTGTCCGAGAAGGACATCGAGGACATCCGCTTCGGCGTCGAGATGGGCGTCGACTT
CGTGGCCGGCTCGTTCATCCGGAAGGCCCAGGACGTGCTGGAGATCCGCCGGGTGATCGAGGAGGCGGGCGGCCACCAGC
AGATCATCTCGAAGGTGGAGTCCCAGGAGGGGTTCGACAACCTGGAGGCCATCCTGCAGGTCTCCGACGGCCTGATGGTG
GCCCGCGGCGACCTGGGGGTGGAGGTGCCCACCGAAGAGGTGCCGCTGATGCAGAAGCGGATGATCGAGCGGGCCAATGC
CATGGGCAAGCCCGTGATCACCGCGACGCAGATGCTGGAGTCCATGGTCAACCGGCCCCGTCCGACCCGGGCCGAGGCCT
CCGACGTGGCCAACGCGATCATGGACGGCACCGACGCCATCATGCTGTCGGCGGAGTCCGCCGCCGGCAAGTACCCGGTG
GAGGCGGTGCGGACGATGGCGACGATCGCCCGCCGCACCGAGGAGGCGCTGGACCACTCGCAGCTGATGGCCCGACGCGG
CCGCTTCGGCCGGATGGACAGCGTCACCGAGGCCATCTCCCACGCGACGGTGACCACGGCCCACGACCTGGGCGCCACGG
CCATCGTCTCGGCCACCACCTCGGGCTTTACCGCCCGTATGGTGTCCAAGTACCGCCCGGGCTGCCCCATCATCGCCGTG
ACCCCGGATCCGCGGGTCGCGCGGCAGCTGCGGCTGGTCTGGGGCGTTTTCCCCGTCGTCGAGCCGGTGGCCTCGGGCAC
TGAGGACCTGACCCAGCGGGCCGTGGAAGGGGCCCTGGTTTCCGGGCTGGTGAAGAACGGCGACCTGGTCGTCATCACCG
CCGGTCTGCCGGTGGGGGTGAAGGGCACCACCAACCTGCTGAAGGTGCACACGGTGGCGGACGTGCTGGCCCAGGGTACG
GGCATCGGCCGGCAGCCGGTCACGGGGCGGGCCGTCATCGTGCGGTCCGAGGAGGACCTGGCCCGCGTGCAGCCCGGCGA
CATCCTGGTCAGCAGGCTGACCGACGCCGACTGCGTCCCCGCGATGGAGCGGGCCGCGGGGATCATCACGGAAGAGGGCG
GCCTGACCTCGCACGCGGCGGTGGCCGGCATCTCGCTGGGCAAGCCCGTGATCGTGGGCGCCGAGGGCGCCACCCGCCGC
ATTCCCGACGGGGCGATCATCACGATGGACGTGGCCCATGGCCTGGTCTTGCGCGGCGAGGCCACCGTCAAGTAA

Protein sequence :
MLRKTKIVATIGPASEQVEVLTRLIEAGVDVCRLNFSHGTLDEQRRRIENIREAGRRVGKDVAIMIDLKGPEIRIGTFEN
GKVTLRDGDLFTLTTEPCVGNQERVWVQYPGIVHDVAEGGYLLLDDGNLTFQAVEVTPTEIRCRVIVGGVLSDRKKVNLP
GTKVSLPALSEKDIEDIRFGVEMGVDFVAGSFIRKAQDVLEIRRVIEEAGGHQQIISKVESQEGFDNLEAILQVSDGLMV
ARGDLGVEVPTEEVPLMQKRMIERANAMGKPVITATQMLESMVNRPRPTRAEASDVANAIMDGTDAIMLSAESAAGKYPV
EAVRTMATIARRTEEALDHSQLMARRGRFGRMDSVTEAISHATVTTAHDLGATAIVSATTSGFTARMVSKYRPGCPIIAV
TPDPRVARQLRLVWGVFPVVEPVASGTEDLTQRAVEGALVSGLVKNGDLVVITAGLPVGVKGTTNLLKVHTVADVLAQGT
GIGRQPVTGRAVIVRSEEDLARVQPGDILVSRLTDADCVPAMERAAGIITEEGGLTSHAAVAGISLGKPVIVGAEGATRR
IPDGAIITMDVAHGLVLRGEATVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 8e-94 49
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-93 49
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-93 49
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 8e-94 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STH838 YP_074667.1 pyruvate kinase VFG0479 Protein 3e-94 49