Gene Information

Name : STH677 (STH677)
Accession : YP_074506.1
Strain : Symbiobacterium thermophilum IAM 14863
Genome accession: NC_006177
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 745579 - 746346 bp
Length : 768 bp
Strand : +
Note : -

DNA sequence : 
ATGGTACCGGTGCTTGAAGCGCGGGCGCTTACGAAGGAGTACGCGCGCGGACGGTTGCCAGTGACCGTGCTCCGCGGCGT
CGACGTGCAGGTGCACCCGTCCGAGTTCCTGGCGATCATGGGACCCAGCGGATCCGGCAAGTCCACGCTGCTGCACATCC
TCGGCGCGCTGGATCAGCCCACTGGGGGCGAGATTCGCTTCGAGGGGCAACTGGTCCCCGAGTGGGGCCGGGAGCCCGGG
GCGACCGAGTTCCGCCGGCGCCGCCTCGGTTTCGTGTTCCAGTCCTTCAACCTCGTGCGCAGCCTGACGGCGCGGGAGAA
CGTGGGGCTGCCGCTGATTCTGCAAGGCGCGCCCGCCAGCGTCGTGGAGCGTGAGACGGAGGTATGGCTGAAGCGGGTCG
GCCTCTGGGACCGGCGTGACCACTATCCGTACGAGCTGTCCGGCGGGGAGCAGCAGCGGACTGCGGTGGCCAGGGCGCTG
GTGCACAACCCTGCGCTGCTCCTGGCGGACGAGCCGACGGGCAACCTCGATTCCGCCAACGGGCTGCAGGTGCTCGACCT
TCTCGAGCGGGTCTGCCGGGAGCAGGGCACGACCGTCCTCCTGGTGACCCACGATCCCGTCGCGGCTTCCCGGGCCGACC
GGGTCGTGTACCTCCGGGACGGGCGCATCGTGGACGAATGGGAGCAGGGGCGCGACTGGACGCGATCCATGCGCGTGCAG
CACACCCTGTCCAGGCTGCAGCACCTGGTGGAAGGTGAGGCCTCATGA

Protein sequence : 
MVPVLEARALTKEYARGRLPVTVLRGVDVQVHPSEFLAIMGPSGSGKSTLLHILGALDQPTGGEIRFEGQLVPEWGREPG
ATEFRRRRLGFVFQSFNLVRSLTARENVGLPLILQGAPASVVERETEVWLKRVGLWDRRDHYPYELSGGEQQRTAVARAL
VHNPALLLADEPTGNLDSANGLQVLDLLERVCREQGTTVLLVTHDPVAASRADRVVYLRDGRIVDEWEQGRDWTRSMRVQ
HTLSRLQHLVEGEAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-34 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-35 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STH677 YP_074506.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-35 47
STH677 YP_074506.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-42 45
STH677 YP_074506.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 3e-35 42
STH677 YP_074506.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STH677 YP_074506.1 ABC transporter ATP-binding protein VFG2059 Protein 2e-16 42