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Name : lysS1 (STH525) Accession : YP_074354.1 Strain : Symbiobacterium thermophilum IAM 14863 Genome accession: NC_006177 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 565729 - 567216 bp Length : 1488 bp Strand : + Note : - DNA sequence : ATGCTGTCCCGAGAGGAGCAACTGCGGGAGGCGCGCCGGGCCAAGATGCGCACCCTGCGGGAAGCGGGGGTCGATCCCTT CGGCACCCGGTTCGGCGACCGGCGGCTGATGGGCGACCTGCGCCGCCAGTACGGGGAGGCGTCTGCCGAGGAGCTGGACG CCGCACGGATTCCCGCGCGGGTGGCGGGCCGGGTCGTCACCGTCCGGTCCCACGGCAAGATCGGGTTCGCCCACCTGCAG GATGGCTCCGGCCGGCTGCAGATCTACCTGCGGCTTCCGGAGCTGAGCGAACGGGAGCGCCTGGTCTGGGAGCACCTCGA CCTGGGCGACATCGTCGGCGCGGAGGGGGTCCTGATGCGCACCCGCACCGGCGAGCTGACGGTGAAGGTGGAGTCGCTGA CCATGCTGACCAAGGCGCTCAGACCGCTGCCGGACAAGCATGCCGGGTTGCGGGACGTGGAGCTCCGCTACCGGGAGCGC CACCTGGACCTGCTGGTCAACCCCGAGAGCCGGGCCGTCTTCGAGGCGCGGTCCCGCATCGTCGCCAGCCTGCGCCGCAC GCTGGACGAGCTGGGCTTCATCGAGGTGGAGACCCCGGTGCTGGTGCCGCTGGCGGGCGGAGCGGCCGCCCGCCCCTTCC TGACCTACCACAACGCCCTGGACCGGCAGCTCTCCCTCCGCATCGCCACGGAGCTGCACCTGAAGCGGCTGGTGGTCGGC GGCATGGAGCGGGTCTACGAGATCGGCCGGGTCTTCCGCAATGAGGGGCTCTCCACCCGGCACAACCCGGAGTTCACCTC GCTGGAGGCCTATCAGGCCTACGCGGACTACCGGGACATGATGGACCTCACCGAGCGGCTGGTGCAGAACGCGGCCCGGG CCGTGAACGGCAGCCTCCGGGCCGGGGAGATCGACCTGACCGGCCCCTTCCGGCGCATCACGATGGCCGAGGCGGTGAAG GAGGCCACGGGCATCGACGTCATGGCCCTCGGGTCGTCGGGGGACGAGCGGAGGGACGCGGAGGCGGTGCGGGCCGCCGC CGAGGCCGCCGGATACGAGGTGGAGGCTGCGACCTGGGGCGGGCTGCTGGCCGAGCTGTTCGAGCGGTACGCCGAGGACC GGCTGGTTCAGCCCACCTTCGTCCTCGGGCACCCGGTGGAGACGTCCCCGCTGGCCAGGCGCGACCCCCGCGATCCACGG CTGACCGAGCGGTTCGAGCTGTACGTGCAGGGGCGGGAGATCGCCAACGCGTTCTCGGAGTTGAACGACCCGGAGGACCA GCGCCGGCGGTTCGAGGCGCAGCTGGCGCAGCGGCAGGCGGGCGACGAGGAGGCGCACCCGATGGACGAGGACTTCCTCG CCGCCCTGGAGGTGGGCCTGCCGCCGACGGGCGGCCTGGGCATCGGCGTGGACCGGCTGGTCATGCTGCTCACCGGGGCG CCGTCCATTCGCGATGTCATCCTGTTCCCGACCATGCGGAACCGGTAG Protein sequence : MLSREEQLREARRAKMRTLREAGVDPFGTRFGDRRLMGDLRRQYGEASAEELDAARIPARVAGRVVTVRSHGKIGFAHLQ DGSGRLQIYLRLPELSERERLVWEHLDLGDIVGAEGVLMRTRTGELTVKVESLTMLTKALRPLPDKHAGLRDVELRYRER HLDLLVNPESRAVFEARSRIVASLRRTLDELGFIEVETPVLVPLAGGAAARPFLTYHNALDRQLSLRIATELHLKRLVVG GMERVYEIGRVFRNEGLSTRHNPEFTSLEAYQAYADYRDMMDLTERLVQNAARAVNGSLRAGEIDLTGPFRRITMAEAVK EATGIDVMALGSSGDERRDAEAVRAAAEAAGYEVEAATWGGLLAELFERYAEDRLVQPTFVLGHPVETSPLARRDPRDPR LTERFELYVQGREIANAFSELNDPEDQRRRFEAQLAQRQAGDEEAHPMDEDFLAALEVGLPPTGGLGIGVDRLVMLLTGA PSIRDVILFPTMRNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-97 | 46 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 5e-75 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS1 | YP_074354.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-97 | 46 |
