Gene Information

Name : STH3303 (STH3303)
Accession : YP_077128.1
Strain : Symbiobacterium thermophilum IAM 14863
Genome accession: NC_006177
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1576
EC number : -
Position : 3528739 - 3529224 bp
Length : 486 bp
Strand : -
Note : -

DNA sequence : 
TTGCGGATCCGGCTGGTGACGGTGGGCAAGGTGAAGGAGAAGTACCTGCAGGACGGGGTGCAGGAGTACCTGAAGCGGCT
GCGTCCCTACGCCCGGGTGGAGATCGTGACGGTGCCGGACGAGCCGATCCCGGACGGTGCCTCGCCGGCCCAGGAGGCCC
AGGTGATGCAGCGGGAGGGGGAGCGGCTTCTCCGCGCCCTCGACCAGGGTGGCCAGGAGCACGTGGTGGTGCTGGACGGG
CGGGGGAAGAACTTTTCGTCCGAGGAGCTGGCGGCTTTCCTGGCGGAGCGTGCCCTGCACGGGGACGCCAACCTGGCCTT
CGTCATCGGCGGCTCGCTGGGGCTGGACCCGGCGGTGCTGGCCCGCGCGGGCACGACGCTCTCGCTGGGGCGGATGACGT
TCCTGCATCAGATGGTGCCGCTGATTCTGCTGGAGCAAATCTACAGGGCGTTTAAGATTAACCGGGGGGAGAAGTACCAC
AAGTAA

Protein sequence : 
MRIRLVTVGKVKEKYLQDGVQEYLKRLRPYARVEIVTVPDEPIPDGASPAQEAQVMQREGERLLRALDQGGQEHVVVLDG
RGKNFSSEELAAFLAERALHGDANLAFVIGGSLGLDPAVLARAGTTLSLGRMTFLHQMVPLILLEQIYRAFKINRGEKYH
K

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 5e-34 50
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 5e-34 50
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 2e-19 50
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 2e-33 48
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 2e-33 48
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 1e-33 48
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 2e-33 48
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 2e-33 48
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 2e-33 48
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 3e-34 48
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 2e-33 48
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 2e-33 48
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 2e-33 48
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 3e-33 48
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 2e-33 48
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 2e-33 48
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 3e-33 48
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 1e-30 47
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 4e-32 47