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Name : fliP (STH2991) Accession : YP_076818.1 Strain : Symbiobacterium thermophilum IAM 14863 Genome accession: NC_006177 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 3212554 - 3213315 bp Length : 762 bp Strand : - Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGCGTAGCGCACGGATCCTGCGCCCGCTGCTGCTCACCGCGGCTCTCCTGGCGCTGGCGGCGCCGGCCGCGCTGGCCCA GCCGCTGGAGATTCCCACCTTCGACTTCATCCGGCCCGCGGAGACGCCCCAGGAGGGGCTGCAGACGATGCAGCTGCTCC TCCTGCTCACGGTGCTCACGCTGGCTCCGGCCATCATCATCCTCTGCACCTCCTTCACGCGCATCATCGTCGTGTTCGGC TTCATCCGCACGGCGCTGGGGCTGCAGCAGACGCCGCCGAACCAGGTGCTCATCGGCCTTGCGCTGTTCCTCACCGCCGC GGTGATGATGCCGACCTTCAGCGAGATCAACCAGACCGCCGTGCAGCCCTACCTGGCCGGGGAGATCGACCAGGTGGAGG CCATCGAGCGGGGGGCGCTGCCGCTGAAGGCCTTCATGCTCCGGCAGACCCGTGAGGCCGACCTCGGCCTGATGCTGGAG GTGAGCGGTCAGCCGGCGCCGGAAGGGCCCGAGGACGTCAGCTTCCTCACCGTGGTGCCCGCGTTCGCCCTCAGCGAACT CAAGACCGCGTTCACCATGGGCTTTCTGATCTACCTGCCCTTCATCATCATCGACCTCATCACCGCCAGCCTCATGATGT CCCTGGGCATGATGATGGTGCCGCCGACCCTGATCTCGCTGCCCTTCAAGGTGCTGCTCTTCGTGCTGGTCGACGGCTGG CACCTCGTGGTGGAGTCGCTGGTCCGAAGTTTCACGGGATAA Protein sequence : MRSARILRPLLLTAALLALAAPAALAQPLEIPTFDFIRPAETPQEGLQTMQLLLLLTVLTLAPAIIILCTSFTRIIVVFG FIRTALGLQQTPPNQVLIGLALFLTAAVMMPTFSEINQTAVQPYLAGEIDQVEAIERGALPLKAFMLRQTREADLGLMLE VSGQPAPEGPEDVSFLTVVPAFALSELKTAFTMGFLIYLPFIIIDLITASLMMSLGMMMVPPTLISLPFKVLLFVLVDGW HLVVESLVRSFTG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 4e-29 | 42 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 4e-29 | 42 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 4e-29 | 42 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 4e-29 | 42 |
| hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 1e-22 | 42 |
| hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 1e-27 | 41 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-28 | 41 |
| hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 2e-22 | 41 |
| XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 1e-28 | 41 |
| hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 1e-28 | 41 |
| hrcR | AAD21321.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-28 | 41 |
| hrcR | NP_640757.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 3e-28 | 41 |
| hrcR | YP_362153.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 3e-28 | 41 |
| hrcR | YP_198720.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 9e-28 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_076818.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 1e-50 | 56 |
| fliP | YP_076818.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 1e-45 | 54 |
| fliP | YP_076818.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 4e-46 | 54 |
| fliP | YP_076818.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 3e-44 | 51 |
| fliP | YP_076818.1 | flagellar biosynthesis protein FliP | VFG0188 | Protein | 4e-31 | 43 |
| fliP | YP_076818.1 | flagellar biosynthesis protein FliP | VFG0044 | Protein | 3e-33 | 43 |
