|
Name : STH2701 (STH2701) Accession : YP_076530.1 Strain : Symbiobacterium thermophilum IAM 14863 Genome accession: NC_006177 Putative virulence/resistance : Unknown Product : transposase subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 2894345 - 2895871 bp Length : 1527 bp Strand : + Note : - DNA sequence : ATGCGCAAGATCAGAGAGATCCTTCGCTTGAAGTGGGAGGTCGGGCTCTCCGCCCGGCAGATTGCCCGGAGCCTCTCGAT CTCGCACAGCACCGTGCTGGACATGCTTCGGCGGCTTGAATGCTCCGGTCTTTCCTGGCCGCTGCCGAACATCGACGACG CAGAACTTGAGGCCAAGCTTTACCCAGGAAACCCCCAAGGGCTAGTAGAGCGGCCCTTGCCAGACATGGCCTACATCCAC CGGGAACTGGCCCGAAAAGGGGTTACCCTGCAGCTCCTGTGGTGGGAATATAAGCAGAATCATCCAGATGGGCTGCAGTA CAGCCAGTTCTGCCAGCGATACCGGCAGTGGCGTTCCAAGCTCGATGTCGTTCTCCGGCAACCGCATCGGGCAGGTGAGC AGATGCAGGTGGATTTCGCCGGCGATACCGTGCCCATTCATGACCGCGAGACGGGAGAGGTTTGGCAGGCTCCGATCTTT GTTGCCGTTCTGCCGGCCAGCAATTACACCTTTGCCAAGGCCTATCCGGCTCAGGACCTGCGTTCCTGGATCAAAGCCCA CTGCGACGCCCTGGAGTTCTTCGGTGGCGTTCCAGAGATCATCGTGCCGGACAATCCGAAGGCCGGCGTCACCCGCGCTT GCCGCTACGAACCGGATCTCAACCCGGCTTATCAGGAAATGGCGGCCCATTACGGCGCTGCGGTCATTCCGGCAAGACCC CGCAGCCCCAGGGATAAGGCGAAAGTCGAAAACGCGGTCCTGGTGGTGGAGCGCTGGATTCTTGCCGCCCTGCGGAACCA CACCTTTTTCAGTCTTCACGACGCGAACCGGGCAATTCGAGAGGCCGTGGCCAGACTCAACGACCGACCGTTCCAAAAAC TCGAAGGAACGCGCCGGAGCCTGTACGAAACGCTGGACAAGCCGGCGTTGCGCCCTTTACCGCCGCAGCGTTATGAGTTT GCTGAGTGGCGGAAAGCCAAGGTCAATCTCGACTACCATGTCGAGGTCGACCGCAACTACTACAGTGTCCCGTACCCGTT GGTTGGGGAGACGGTGGATATCCGCCTCACGGACGGCCTGGTGGAAATCTTGCACCGGGGAAAACGAGTAGCCTGCCATC CACGGGCGACCGGCCGTGGACGGTCCGTCACCCAGATTCAGCACATGGCAGCCTCCCACCGCCGGCATCGGGAATGGACC CCGTCCAAGTTGCGGCGTTGGGCGGAATCGGTCGGACCCCACACGGCGCAGTTGGTGGTGACGATCCTGGAGGAGAAGCC GCATCCGGAGCAGGGCTTCCGGTCGTGCCTTGGCATCATCCACCTGGCCAGGAAGTATGGCTCCGACCGTCTCGAAGCGG CCGCCGCCCGGGCATGTGCGGCCCGGACGTTCAGCTACAGCAGTGTGAAGTCCATCCTGGCCCATAACCTCGATCAAGCG CCGCTGCCTGGCCCGCCGGACAACCAAGCCACTCCGGTGCATCCCAATCTGCGGGGCCCCGACTATTACGCAGGGGGAGG GCCGTAA Protein sequence : MRKIREILRLKWEVGLSARQIARSLSISHSTVLDMLRRLECSGLSWPLPNIDDAELEAKLYPGNPQGLVERPLPDMAYIH RELARKGVTLQLLWWEYKQNHPDGLQYSQFCQRYRQWRSKLDVVLRQPHRAGEQMQVDFAGDTVPIHDRETGEVWQAPIF VAVLPASNYTFAKAYPAQDLRSWIKAHCDALEFFGGVPEIIVPDNPKAGVTRACRYEPDLNPAYQEMAAHYGAAVIPARP RSPRDKAKVENAVLVVERWILAALRNHTFFSLHDANRAIREAVARLNDRPFQKLEGTRRSLYETLDKPALRPLPPQRYEF AEWRKAKVNLDYHVEVDRNYYSVPYPLVGETVDIRLTDGLVEILHRGKRVACHPRATGRGRSVTQIQHMAASHRRHREWT PSKLRRWAESVGPHTAQLVVTILEEKPHPEQGFRSCLGIIHLARKYGSDRLEAAAARACAARTFSYSSVKSILAHNLDQA PLPGPPDNQATPVHPNLRGPDYYAGGGP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_3528 | YP_854247.1 | transposase for ISEc12 | Not tested | PAI I APEC-O1 | Protein | 3e-105 | 47 |
| unnamed | CAC39294.1 | hypothetical protein | Not tested | LPA | Protein | 3e-105 | 47 |
| ORF_6 | AAZ04417.1 | putative transposase subunit | Not tested | PAI I APEC-O1 | Protein | 2e-105 | 47 |
| VPI2_0005c | ACA01822.1 | IstA | Not tested | VPI-2 | Protein | 1e-106 | 44 |
