Gene Information

Name : STH2287 (STH2287)
Accession : YP_076116.1
Strain : Symbiobacterium thermophilum IAM 14863
Genome accession: NC_006177
Putative virulence/resistance : Unknown
Product : IS21 family transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 2462899 - 2463528 bp
Length : 630 bp
Strand : +
Note : -

DNA sequence : 
GTGATCCATCGGGAAGACAACCAACTCCAGCGCCGTCTCAAGGCCGCCGGCTTCCCTGTTCCCAAAACACTGGAGTCCTT
CGACTTCACGGTCATGCCGTCCGTGAACAAGGCCAAGATCCTGGCGCTGAGCAAGAGTGAATACATCCGGGATCGGGAAA
ACATCCTCCTTGTTGGAAACAGCGGGACAGGTAAGACTCACCTAGCTACAGCACTCGGCATCGCAGCGTGCCGACAGGGC
TACCGCGTTCGCTTCTGGCGCGTGGGCCAGTTCGTTGCCGAACTGCAGGAGGCGCAGAACGAGCACCGCCTCAGCCGCCT
CGAAAAGCAGTGGCTACGGTTCGACCTCGTCGTGCTGGACGAGCTTGGCTATGTGTCCCTCAGCCGCCCGGCCAGTGAAC
TGCTCTTCCACTTTGTCGCCGCACGGTACGAGCGGGGCAGCCTGATCATCACAACGAACCTGGAATTCTCGGAATGGCCG
CAGGTGTTCGGGGACCAGAAGATGACAGCAGCGTTGGCAGACCGTGTGACTCACAAGGCCCACATCATCGAGATGAATGG
GGAGTCGTACCGGTTCCGTGAGACCCTTCGACGGCAGGAAGCTTTGAAGCACCACCCGGAAACACCGTAA

Protein sequence : 
MIHREDNQLQRRLKAAGFPVPKTLESFDFTVMPSVNKAKILALSKSEYIRDRENILLVGNSGTGKTHLATALGIAACRQG
YRVRFWRVGQFVAELQEAQNEHRLSRLEKQWLRFDLVVLDELGYVSLSRPASELLFHFVAARYERGSLIITTNLEFSEWP
QVFGDQKMTAALADRVTHKAHIIEMNGESYRFRETLRRQEALKHHPETP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
istB AAN62229.1 putative NTP-binding protein of insertion sequence Not tested PAGI-3(SG) Protein 3e-38 44
EC042_4097 YP_006098380.1 putative transposase Not tested Tn2411 Protein 9e-38 44
orfB AAC61729.1 OrfB Not tested PAI I CFT073 Protein 4e-30 42
c3608 NP_755483.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-31 42
c5145 NP_756993.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STH2287 YP_076116.1 IS21 family transposase VFG1729 Protein 1e-31 42