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Name : STH1908 (STH1908) Accession : YP_075737.1 Strain : Symbiobacterium thermophilum IAM 14863 Genome accession: NC_006177 Putative virulence/resistance : Unknown Product : type I restriction-modification system endonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 2046785 - 2049976 bp Length : 3192 bp Strand : - Note : - DNA sequence : ATGCCCGTCCTGAGCGAAGAGACCCTGGAACAGGCCGCACTCGAATGGCTCCGCGAGCTCGGCTGGGCGGTCGCACATGG GCCCGACATCTCCCCCGTGGACGCCAACACCCCCGGCACCGAGCGGGAGTCCTACCGCCAGGTTGTGCTGACGGGCCGGC TGCGGGAGGCCATCCGCGGCCTCAACCCCCACATCCCGGCCTCGGCGCAGGAGGACGCCCTCCGGCAGGTGGTGAGCCCC AACATCCCCGGTCTGGTGCAGGCCAACCGGCAGTTCCATCGGTGGCTCGTGGAGGGCGTGCCGGTCGAGTTCCAGAAGGA CGGGGAGACCCGGGGCGACCGGGTGCGGCTGGTGGACTTCACCGACCCGAGTCGCAACGACTGGCTGGCGGTCAACCAGC TCTCCATTCAGGGGCCGAAGAAGGTGCGCAGGCCGGATATCATCCTGTACCTCAACGGCCTGCCCATCGTCGTCATCGAG CTCAAGAACCCGGCGGACGAAAGCGCCGACATCTGGGCCGCCTTCAACCAGCTCCAGGCCTACAAGGAGGACATCCCCGA CCTCTTCGTCTACAACGAACTGCTGGTCATCTCCGACGGCCTCTCCGCCCGCATGGGGTCGCTGACCGCCAACCGGGAGC GGTTCATGGCCTGGCGGACCATCGACGGCCACGAGATCGACCCCCTGGGCGAGATGCGGGAGCTGGAGACCCTGATCCGC GGCGCCTTCCGGCACGACCTGCTGCTGGAGTACCTGCGCTACTTCATCCTCTTCGAAGAGGATGGCCACCTCGTCAAGAA AGTGGCCGGGTACCATCAGTTCCACGCCGTCCGGGCCGTGGTGGAGAGCGTGCTGAAGGCATCGGCCCCGGGCGGCTCCC GCAAGGGCGGCGTCGTCTGGCACACCCAGGGGGCCGGCAAGTCCCTGGAGATGACCTGCCTCGCCGGCCGGCTGATGAGC CACCCGGACCTGAAAAACCCCACCATCGTGGTGGTCACCGACCGGAACGACCTGGACAACCAGCTCTTCGGCGTCTTCGC CGGCGCCACGGAACTCCTGCGGGAGACGCCTGTGCAGGCCGAGACCCGGCCGCGCCTCCGGGAGCTTCTGGCCAACCGGC CGTCGGGCGGCATCATCTTCACCACCATCCAGAAGTTCATGCCCGGCGAGGACGAGGACACCTTCCCGGTGCTCTCCGAG CGGACCAACATCATCGTCATCTGCGACGAGGCCCACCGCAGCCAGTACGGCTTCGCCGCCAGGCTGAGCCTGCCTGAGCG GCGCAGGCGCCCGGCGACCGCACCCATGGGGTCCGGGGGCGACCTGTCCGACCAGATCGCGGCCGAGACGCCCGGCGGGA ACTACGCCGTCCGCTACGGCTACGCCCAGCACATGCGCGACGCCCTGCCGGGGGCCACCTTCGTCGCCTTCACCGGCACC CCCGTTGCCCTGGAGGACCGGAACACCCGGGCCGTCTTCGGTGACTACGTGCACATCTACGACGTGCTGCAGGCGGTGAA GGACGGCGCGACGGTGCCCATCTACTACGAGTCCCGCCTGGCCAAGCTCGACCTGAAGGAGGAGGAGATCCCCCGGATCG ACGAGGCCGTGGAAGAGCTGACCGAGGACGAGGAGGACGACGCCGCGCGGGCCGCTCAGTACCGCCGCTGGACGGCTCTG GAGAAGCTGGTGGGCGCGCCGCCTCGCATCCAGAAGGTGGCCGCCGACCTGGTCGCCCACTTCGAGCGGCGCCTGGCGGC CATGGACGGCAAGGCGATGGTCGTGTGCATGAGCCGGGAGATCTGCGTGCACATGTACAACGCCATCGTCGCCCTGCGGC CCGAGTGGCACGACCCGGATCCCGAAAAAGGCGTCATCAAGATCGTCATGACCGGTTCCGCCGCCGACAAGCCGCTTCTG CGGCCGCACATCTACAGCAAGGAGGTCCGCAAGCGGCTGGAGCGGCGCTTCAAGGACCCCAACGACCCGTTCAAGATCGT CATCGTGCGGGACATGTGGCTCACGGGCTTCGACGCCCCCTGCCTGCACACGATGTACATCGACAAGCCGATGCGGGGCC ACAACCTGATGCAGGCCATCGCCCGGGTCAACCGGGTCTTCAGGGACAAGCCCGGCGGGCTGGTGGTGGACTACATCGGC ATCTCGCACGAGCTGAAACAGGCGCTGCGGGAGTACACCGCCGCGCGGGGCCGGGGCGAGCCGGCCATCGATGCGGAGCG GGCCCTGGACATCCTGCGCGAGAAGATGGATGTGCTTAGGGCGATGCTCCACGGCTGCGACTACTCGGCCTTCCGCACCG AGGCCATGGCGCTTCTGCCCAAGGTGGCCAACCACATCCTGGGGCTGGAGGACGGACAGAAGCGCTTCGCCGACCACGTG GTGGCCGCCTCCAGGGCCTTCGCCCTCTGCTGCACCCTGGAGGGCGCCCTGGCCTACCGGGACGAGCTGGCCTTCTTCCA GGCGGTCAAGGCGGCGCTCTCCAAGCGCGCGGAAACCGACCGGAAGGTGGCGGATGAGCGCAAGGAGGCGGCCCTGCGGC AGATCATCGCCCAGGCGGTGGTCTCCGACGAGGTGGTGGACATCTTCGCCGCGGCGGGGCTCAGCAAGCCCGACATTTCC ATCCTCTCGGAGGAGTTCCTCGACGAGGTGCGCCGGATGAAGGAGCGCAACCTCGCCGTCGAGCTGCTGCAGCGCCTGAT CAAGAACGAGATCAAGGCGCGCTTCGAGACCAACGTGGTCCAGTCGGCGAGGTTCTCGGACCTGCTCCAGCAGGCGCTCA CCCGCTACCGGAACCGCACCATCGAGACGGCGCAGGTGATCGAGGAGCTCATCGCCATGGCCAGGCGCTTCCAGGAGGAG GCGCGGCGGGGCGAGCAGCTCGGGCTGAACGAGGATGAGCTCGCCTTCTACGACGCCCTGGCCAGCAACGAGTCGGCCGT GCGGGAGCTGGGCGACGAGGTGCTGAAGAAGATGGCTGTCGAGCTCACGGAGCGGCTGCGTAAGTCGGTGACCGTGGACT GGGCGCGCCGCGAGACGGTGCGGGCCCGGTTGAGGGTCATGGTGCGCACGCTGCTCCGACGGTATAAGTACCCGCCGGAC CGGCAGGAGGCGGCGACGAACCTGGTGCTGAAGCAGGCGGAGGTGCTGTCGCAGGAGTGGGCCACGGCCTAG Protein sequence : MPVLSEETLEQAALEWLRELGWAVAHGPDISPVDANTPGTERESYRQVVLTGRLREAIRGLNPHIPASAQEDALRQVVSP NIPGLVQANRQFHRWLVEGVPVEFQKDGETRGDRVRLVDFTDPSRNDWLAVNQLSIQGPKKVRRPDIILYLNGLPIVVIE LKNPADESADIWAAFNQLQAYKEDIPDLFVYNELLVISDGLSARMGSLTANRERFMAWRTIDGHEIDPLGEMRELETLIR GAFRHDLLLEYLRYFILFEEDGHLVKKVAGYHQFHAVRAVVESVLKASAPGGSRKGGVVWHTQGAGKSLEMTCLAGRLMS HPDLKNPTIVVVTDRNDLDNQLFGVFAGATELLRETPVQAETRPRLRELLANRPSGGIIFTTIQKFMPGEDEDTFPVLSE RTNIIVICDEAHRSQYGFAARLSLPERRRRPATAPMGSGGDLSDQIAAETPGGNYAVRYGYAQHMRDALPGATFVAFTGT PVALEDRNTRAVFGDYVHIYDVLQAVKDGATVPIYYESRLAKLDLKEEEIPRIDEAVEELTEDEEDDAARAAQYRRWTAL EKLVGAPPRIQKVAADLVAHFERRLAAMDGKAMVVCMSREICVHMYNAIVALRPEWHDPDPEKGVIKIVMTGSAADKPLL RPHIYSKEVRKRLERRFKDPNDPFKIVIVRDMWLTGFDAPCLHTMYIDKPMRGHNLMQAIARVNRVFRDKPGGLVVDYIG ISHELKQALREYTAARGRGEPAIDAERALDILREKMDVLRAMLHGCDYSAFRTEAMALLPKVANHILGLEDGQKRFADHV VAASRAFALCCTLEGALAYRDELAFFQAVKAALSKRAETDRKVADERKEAALRQIIAQAVVSDEVVDIFAAAGLSKPDIS ILSEEFLDEVRRMKERNLAVELLQRLIKNEIKARFETNVVQSARFSDLLQQALTRYRNRTIETAQVIEELIAMARRFQEE ARRGEQLGLNEDELAFYDALASNESAVRELGDEVLKKMAVELTERLRKSVTVDWARRETVRARLRVMVRTLLRRYKYPPD RQEAATNLVLKQAEVLSQEWATA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 57 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 46 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 46 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 46 |
